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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Source | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature ▲ | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
| Escherichia coli | FimH | Mannotriose | Oligosaccharides | Man(a1-3)[Man(a1-6)]Man | Binding | 12010488 | |
| Fusobacterium nucleatum | Lectin-like proteins (adhesin) | unnamed ligand | Oligosaccharides | Gal(b1-4)GlcNAc | Binding | 1894623 | |
| Fusobacterium nucleatum | Lectin-like proteins (adhesin) | unnamed ligand | Oligosaccharides | Gal(b1-3)GalNAc | Binding | 1894623 | |
| Escherichia coli | P-fimbriae | unnamed ligand | Oligosaccharides | Gal(a1-4)Gal | Binding | 12628483 | |
| Escherichia coli | Type 1-fimbriae | trisaccharide: Man(a1-3)Man(b1-4)GlcNAc | Oligosaccharides | Man(a1-3)Man(b1-4)GlcNAc | Binding | 16564136 | |
| Escherichia coli | P-fimbriae | unnamed ligand | Oligosaccharides | Gal(a1-4)Gal(b | Binding | 2885220 | |
| Escherichia coli | Type 1-pili | Mannotriose | Oligosaccharides | Man(a1-3)[Man(a1-6)]Man | Binding | 12010488 | |
| Escherichia coli | Type 1-pili | Mannose oligosaccharides | Oligosaccharides | Man | Binding | 9973330 | |
| Streptococcus suis | 18-kDa proteins | unnamed ligand | Oligosaccharides | Gal(a1-4)Gal | Binding | 8751914 | |
| Escherichia coli | Pertactin | Mannose oligosaccharides | Oligosaccharides | Man | Binding | 10341176 | |
| Escherichia coli | FimG/FimH | Mannose oligosaccharides | Oligosaccharides | Man | Binding | 9973330 | |
| Entamoeba histolytica | Unknown | unnamed ligand | Oligosaccharides | Gal(b1-4)GlcNAc | Binding | 12628483 | |
| Staphylococcus saprophyticus | Unknown | unnamed ligand | Oligosaccharides | Gal(b1-4)GlcNAc | Binding | 2885220 | |
| Streptococcus pneumoniae | Unknown | Trisaccharides | Oligosaccharides | GlcNAc(b1-3)Gal(b1-4)Glc | Binding | 16564136 | |
| Streptococcus pneumoniae | Unknown | Tetrasaccharides | Oligosaccharides | Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc | Binding | 16564136 | |
| Actinomyces naeslundii | Unknown | unnamed ligand | Oligosaccharides | Gal(b1-3)GalNAc | Binding | 12628483 | |
| Helicobacter pylori | SabA (sialic acid-binding adhesin) | Fucosylated Lewis b (Leb) histoblood group antigens | Oligosaccharides | Mucosal surface of the gastric epithelium | Binding | 12640357 | |
| Norovirus | Unknown | Blood group O antigen | Oligosaccharides | Human saliva | Binding | 16707048 | |
| Helicobacter pylori | BabA (blood group antigen binding adhesin) | Fucosylated Lewis b (Leb) histoblood group antigens | Oligosaccharides | Human gastric epithelium | Binding | 9430586 | |
| Human immunodeficiency virus | Unknown | N-acetyl-b-maltoheptaosylamine sulfate (SM) | Oligosaccharides | Human T cells | Binding | 9420059 | |
| Chlamydia trachomatis | Unknown | N-acetyl-b-maltoheptaosylamine sulfate (SM) | Oligosaccharides | HeLa cells | Binding | 9420059 | |
| Herpes simplex virus | Unknown | N-acetyl-b-maltoheptaosylamine sulfate (SM) | Oligosaccharides | Human cervical cells | Binding | 9420059 | |
| Pseudomonas aeruginosa | PA-IIL | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 16762477 | ||
| Helicobacter pylori | Leb-binding adhesin | Fucosylated Lewis b (Leb) histoblood group antigens | Oligosaccharides | Binding | 10341176 | ||
| Norovirus | Unknown | Blood group Lewis b (Leb) antigen | Oligosaccharides | Binding | 18701592 |
