PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Source | Last Updated |
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Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule ▼ | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Escherichia coli | F1C | Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) | Oligoglycosylceramides | Mouse feces | Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer | Not Binding | 11877427 |
Escherichia coli | F1C | Gb2 (Galabiosylceramide) | Diosylceramides | Gal(a1-4)Gal(b1-1)Cer | Not Binding | 10816509 | |
Escherichia coli | F1C | Ceramide | Non-glycosylated Lipids | Cer | Not Binding | 10816509 | |
Escherichia coli | F1C | Gb5 (Forssman glycolipid) | Oligoglycosylceramides | GalNAc(a1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer | Not Binding | 10816509 | |
Escherichia coli | F17 | N-Acetylglucosamine | Monosaccharides | Urine (microvilli of the intestinal epithelium of ruminants) | GlcNAc | Binding | 16564136 |
Pseudomonas aeruginosa | Exoenzyme S | Asialo-GM2 (Gangliotriosylceramide; GgO3) | Oligoglycosylceramides | GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 1679039 | |
Pseudomonas aeruginosa | Exoenzyme S | Lactosylceramide (Lactocerebroside) | Diosylceramides | Gal(b1-4)Glc(b1-1)Cer | Binding | 1679039 | |
Pseudomonas aeruginosa | Exoenzyme S | Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) | Oligoglycosylceramides | Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 1679039 | |
Human immunodeficiency virus | Envelope glycoprotein gp120 | Galactosyl sulfatide | Sulfoglycosphingolipids | Neural receptor | HSO3(-3)Gal(b1-1)Cer | Binding | 1871126 |
Human immunodeficiency virus | Envelope glycoprotein gp120 | Galactosylceramide (Galactocerebroside) | Monoglycosylceramides | Neural receptor | Gal(b1-1)Cer | Binding | 1871126 |
Campylobacter jejuni | Enterotoxin | GM1 | Monosialoglycosphingolipids | Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer | Binding | 12628483 | |
Enterococcus faecalis | EfaA (Lary family) | L-Fucose-containing residues | Saccharides | Fuc | Binding | 12640357 | |
Enterococcus faecalis | EfaA (Lary family) | D-Galactose-containing residues | Saccharides | Gal | Binding | 12640357 | |
Clostridium perfringens | Delta toxin (type C) | GM2(NeuAc) | Monosialoglycosphingolipids | GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer | Binding | 6260669 | |
Clostridium perfringens | Delta toxin | GM2(NeuAc) | Monosialoglycosphingolipids | GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer | Binding | 12628483 | |
Clostridium perfringens | Delta toxin | GM2(NeuAc) | Monosialoglycosphingolipids | GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer | Binding | 15973004 | |
Borrelia burgdorferi | DbpA | Decorin | Proteoglycans | Extracellular matrix (ECM) | Binding | 12761224 | |
Rotavirus | DLP (Double-layered virus particles) | Asialo gangliosides | Neutral Glycosphingolipids | Binding | 10659372 | ||
Hantaan virus | DBA (Dolichos biflorus agglutinin) | N-Acetylgalactosamine | Monosaccharides | Vero E6/P388D1 cells | GalNAc | Binding | 10542025 |
Streptococcus gordonii | CshaB (Antigen I/II) | Fibronectin | Glycoproteins | Binding | 12640357 | ||
Streptococcus gordonii | CshB | Fibronectin | Glycoproteins | Binding | 10341176 | ||
Streptococcus gordonii | CshA (Antigen I/II) | Fibronectin | Glycoproteins | Binding | 12640357 | ||
Streptococcus gordonii | CshA | Fibronectin | Glycoproteins | Binding | 10341176 | ||
Escherichia coli | CsgA (curli) | Plasminogen | Glycoproteins | Binding | 9973330 | ||
Escherichia coli | CsgA (curli) | Fibronectin | Glycoproteins | Binding | 9973330 |
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Last updated: August 19, 2024