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Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Source | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species ▲ | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
| Borrelia burgdorferi | "OspA, OspB, OspC" | Galactosylceramide (Galactocerebroside) | Monoglycosylceramides | Gal(b1-1)Cer | Binding | 16299269 | |
| Borrelia burgdorferi | Unknown | Galactosylceramide (Galactocerebroside) | Monoglycosylceramides | Gal(b1-1)Cer | Binding | 7622201 | |
| Borrelia burgdorferi | Unknown | Galactosylceramide (Galactocerebroside) | Monoglycosylceramides | Gal(b1-1)Cer | Binding | 12628483 | |
| Borrelia burgdorferi | BBK32 | Heparin | Glycosaminoglycans | Mammalian cell surface | Binding | 16368999 | |
| Borrelia burgdorferi | "DbpA, DbpB, Bgp" | Collagen (type I) | Glycoproteins | Binding | 16299269 | ||
| Borrelia burgdorferi | BBK32 | GAGs (glycosaminoglycans) | Glycosaminoglycans | Binding | 18833295 | ||
| Borrelia burgdorferi | "DbpA, DbpB, Bgp" | Heparin | Glycosaminoglycans | Binding | 16299269 | ||
| Borrelia burgdorferi | Unknown | Chondroitin 6-sulfate (C-6S) | Glycosaminoglycans | Vero cells | Not Binding | 9826395 | |
| Borrelia burgdorferi | Unknown | Heparan sulfate (fraction: HS-A) | Glycosaminoglycans | Vero cells | Not Binding | 9826395 | |
| Borrelia burgdorferi | Unknown | Heparan sulfate (fraction: HS-A) | Glycosaminoglycans | Vero cells | Not Binding | 9826395 | |
| Borrelia burgdorferi | Unknown | Heparan sulfate (fraction: HS-A) | Glycosaminoglycans | Vero cells | Not Binding | 9826395 | |
| Borrelia burgdorferi | Unknown | Heparan sulfate (fraction: HS-A) | Glycosaminoglycans | Vero cells | Not Binding | 9826395 | |
| Borrelia burgdorferi | "OspA, OspB, OspC" | Gangliosides | Sialoglycosphingolipids | Binding | 16299269 | ||
| Borrelia burgdorferi | "OspA, OspB, OspC" | Lactosylceramide (Lactocerebroside) | Diosylceramides | Gal(b1-4)Glc(b1-1)Cer | Binding | 16299269 | |
| Borrelia burgdorferi | Unknown | Lactosylceramide (Lactocerebroside) | Diosylceramides | Gal(b1-4)Glc(b1-1)Cer | Binding | 7622201 | |
| Borrelia burgdorferi | Unknown | Lactosylceramide (Lactocerebroside) | Diosylceramides | Gal(b1-4)Glc(b1-1)Cer | Binding | 12628483 | |
| Borrelia burgdorferi | Unknown | Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH) | Oligoglycosylceramides | Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 7622201 | |
| Borrelia burgdorferi | Unknown | Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH) | Oligoglycosylceramides | Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 12628483 | |
| Borrelia burgdorferi | Unknown | Heparin (N-desulfated, N-acetylated) | Glycosaminoglycans | Vero cells | Binding | 9826395 | |
| Borrelia burgdorferi | DbpA | Decorin | Proteoglycans | Extracellular matrix (ECM) | Binding | 12761224 | |
| Borrelia burgdorferi | BBK32 | Fibronectin | Glycoproteins | Binding | 18833295 | ||
| Borrelia burgdorferi | "DbpA, DbpB, Bgp" | Decorin | Proteoglycans | Binding | 16299269 | ||
| Borrelia burgdorferi | Unknown | Heparan sulfate (fraction: HS-D) | Glycosaminoglycans | Vero cells | Not Binding | 9826395 | |
| Borrelia burgdorferi | Unknown | Dermatan sulfate | Glycosaminoglycans | Vero cells | Not Binding | 9826395 | |
| Borrelia burgdorferi | Unknown | Heparan sulfate (fraction: HS-D) | Glycosaminoglycans | Vero cells | Not Binding | 9826395 |
