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Glycan Structure Repository
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9Z2V6 | Histone deacetylase 5 | ||
| Q9Z2W9 | Glutamate receptor 3 | ||
| Q9Z2Y3 | Homer protein homolog 1 | ||
| Q9Z327 | Synaptopodin | ||
| Q9Z351 | Potassium voltage-gated channel subfamily KQT member 2 | ||
| Q9ZTX8 | Auxin response factor 6 | ||
| Q9ZU48 | Expressed protein | ||
| Q9ZUL3 | Protein indeterminate-domain 5, chloroplastic | ||
| Q9ZVI3 | KH domain-containing protein At2g38610 | ||
| S4R1M9 | Oxysterol-binding protein-related protein 10 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Rattus norvegicus |
| Initial triggering of complement | Gallus gallus |
| Initial triggering of complement | Homo sapiens |
| Initial triggering of complement | Bos taurus |
| Initial triggering of complement | Rattus norvegicus |
| Initial triggering of complement | Canis familiaris |
| Initial triggering of complement | Xenopus tropicalis |
| Initial triggering of complement | Sus scrofa |
| Initial triggering of complement | Mus musculus |
| Lectin pathway of complement activation | Xenopus tropicalis |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 7236226 | Biosynthesis of glycoproteins by membranes of Acer pseudoplatanus. Incorporation of mannose and N-acetylglucosamine | Barr J | 1980 Nov 15 |
|
| 7459337 | Structural analysis of glycosphingolipids by high-resolution proton nuclear magnetic resonance spectroscopy | Dabrowski J | 1980 Nov 01 |
|
| 7419967 | Accumulation of glycoprotein-derived metabolites in neural and visceral tissue in aspartylglycosaminuria | Maury CP | 1980 Nov |
|
| 7460921 | Improved Procedures for Purification of the Bandeiraea simplicifolia I Isolectins and Bandeiraea simplicifolia II Lectin by Affinity Chromatography | DELMOTTE FM | 1980 Nov |
|
| 7449816 | Effect of proglumide on glycoprotein synthesis in aspirin-induced gastric erosions in rats | Umetsu T | 1980 May 30 |
|
| 6989834 | Biosynthesis of lipid A. In vivo formation of an intermediate containing 3-deoxy-D-mannoctulosonate in a mutant of Salmonella typhimurium. | Walenga RW | 1980 May 10 |
|
| 7372654 | Substrate stabilization of lysozyme to thermal and guanidine hydrochloride denaturation. | Pace CN | 1980 May 10 |
|
| 7407676 | Mannose containing glycopeptides of cells derived from human teratocarcinoma (line PA 1) | Rasilo ML | 1980 May 01 |
|
| 6448271 | An indirect assay for canine leukocyte migration inhibitory factor (LIF): Demonstration of its species specificity | Ansfield MJ | 1980 May |
|
| 7371845 | The occurrence of III3‐α‐fucosyllactoneotetraosylceramide in human brain | Vanier MT | 1980 Mar 24 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Dynamic glycosylation of the transcription factor CREB: a potential role in gene regulation. |
|
J Am Chem Soc | 2003 Jun 4 | 12769553 |
| Effect of okadaic acid on O-linked N-acetylglucosamine levels in a neuroblastoma cell line. |
|
Biochim Biophys Acta | 1999 Oct 18 | 10572927 |
| Regulation of a cytosolic and nuclear O-GlcNAc transferase. Role of the tetratricopeptide repeats. |
|
J Biol Chem | 1999 Nov 5 | 10542233 |
| An N-terminal region of Sp1 targets its proteasome-dependent degradation in vitro. |
|
J Biol Chem | 1999 May 21 | 10329728 |
| Vertebrate lens alpha-crystallins are modified by O-linked N-acetylglucosamine. |
|
J Biol Chem | 1992 Jan 5 | 1730617 |
