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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O75949 | NALCN channel auxiliary factor 2 | ||
| O75952 | Calcium-binding tyrosine phosphorylation-regulated protein | ||
| O75956 | Cyclin-dependent kinase 2-associated protein 2 | ||
| O75962 | Triple functional domain protein | ||
| O75973 | C1q-related factor | ||
| O75976 | Carboxypeptidase D | ||
| O76021 | Ribosomal L1 domain-containing protein 1 | ||
| O76027 | Annexin A9 | ||
| O76031 | ATP-dependent clpX-like chaperone, mitochondrial | ||
| O76038 | Secretagogin |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Antimicrobial peptides | Rattus norvegicus |
| E.coli O10 | Escherichia coli |
| E.coli O103 | Escherichia coli |
| E.coli O105 | Escherichia coli |
| E.coli O109 | Escherichia coli |
| E.coli O110 | Escherichia coli |
| E.coli O111 | Escherichia coli |
| E.coli O112ab | Escherichia coli |
| E.coli O113 | Escherichia coli |
| E.coli O115 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 36726762 | A core epitope targeting antibody of SARS-CoV-2 | Zhao S | 2022 Oct 26 |
|
| 36288283 | A cocktail of protective antibodies subverts the dense glycan shield of Lassa virus | Li H | 2022 Oct 26 |
|
| 36156831 | Hybrid in vitro/in silico analysis of low‐affinity protein–protein interactions that regulate signal transduction by <scp>Sema6D</scp> | Tanaka T | 2022 Oct 26 |
|
| 36200915 | Bacterial Outer Membrane Polysaccharide Export (OPX) Proteins Occupy Three Structural Classes with Selective β-Barrel Porin Requirements for Polymer Secretion | Saïdi F | 2022 Oct 26 |
|
| 36274064 | Cryomicroscopy reveals the structural basis for a flexible hinge motion in the immunoglobulin M pentamer | Chen Q | 2022 Oct 23 |
|
| 36272978 | Molecular basis for isoform-selective inhibition of presenilin-1 by MRK-560 | Guo X | 2022 Oct 22 |
|
| 36271110 | Prediction of decreased estimated glomerular filtration rate using liver fibrosis markers: a renal biopsy-based study | Mima A | 2022 Oct 21 |
|
| 36264808 | Structure of the hepatitis C virus E1E2 glycoprotein complex | Torrents de la Peña A | 2022 Oct 21 |
|
| 36266488 | Fructose-1,6-bisphosphatase 1 functions as a protein phosphatase to dephosphorylate histone H3 and suppresses PPARα-regulated gene transcription and tumour growth | Wang Z | 2022 Oct 20 |
|
| 36080360 | Crystal structure of human CD47 in complex with engineered SIRPa.D1(N80A) | Yu J | 2022 Oct 19 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Dynamic glycosylation of the transcription factor CREB: a potential role in gene regulation. |
|
J Am Chem Soc | 2003 Jun 4 | 12769553 |
| Effect of okadaic acid on O-linked N-acetylglucosamine levels in a neuroblastoma cell line. |
|
Biochim Biophys Acta | 1999 Oct 18 | 10572927 |
| Regulation of a cytosolic and nuclear O-GlcNAc transferase. Role of the tetratricopeptide repeats. |
|
J Biol Chem | 1999 Nov 5 | 10542233 |
| An N-terminal region of Sp1 targets its proteasome-dependent degradation in vitro. |
|
J Biol Chem | 1999 May 21 | 10329728 |
| Vertebrate lens alpha-crystallins are modified by O-linked N-acetylglucosamine. |
|
J Biol Chem | 1992 Jan 5 | 1730617 |
