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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9FUY2 | Transcriptional corepressor LEUNIG | ||
| Q9FWQ5 | Histone acetyltransferase HAC12 | ||
| Q9FXA2 | Polyadenylate-binding protein 8 | ||
| Q9FXT6 | Peroxisomal membrane protein PEX14 | ||
| Q9FZK0 | Squamosa promoter-binding-like protein 11 | ||
| Q9GZM5 | Protein YIPF3 | ||
| Q9GZN7 | Protein rogdi homolog | ||
| Q9GZR1 | Sentrin-specific protease 6 | ||
| Q9GZR5 | Very long chain fatty acid elongase 4 | ||
| Q9GZU2 | Paternally-expressed gene 3 protein |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O116 | Escherichia coli |
| E.coli O118 | Escherichia coli |
| E.coli O12 | Escherichia coli |
| E.coli O126 | Escherichia coli |
| E.coli O126H27 | Escherichia coli |
| E.coli O129 | Escherichia coli |
| E.coli O13 | Escherichia coli |
| E.coli O132 | Escherichia coli |
| E.coli O135 | Escherichia coli |
| E.coli O136 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 38378654 | Structural insights into cholesterol transport and hydrolase activity of a putative human RNA transport protein SIDT1 | Liu W | 2024 Feb 20 |
|
| 38367136 | Role of O-GlcNAcylation in Central Nervous System Development and Injuries: A Systematic Review | Zhang L | 2024 Feb 17 |
|
| 38366389 | HSF1 Increases EOGT-Mediated Glycosylation of Notch1 to Promote IL-1β-Induced Inflammatory Injury of Chondrocytes | Huang Y | 2024 Feb 16 |
|
| 38307019 | Evolution of human H3N2 influenza virus receptor specificity has substantially expanded the receptor-binding domain site | Thompson AJ | 2024 Feb 14 |
|
| 38354260 | The structure of theCaenorhabditis elegansTMC-2 complex suggests roles of lipid-mediated subunit contacts in mechanosensory transduction | Clark S | 2024 Feb 14 |
|
| 38356181 | Structure- and machine learning-guided engineering demonstrate that a non-canonical disulfide in an anti-PD-1 rabbit antibody does not impede antibody developability | Liang WC | 2024 Feb 14 |
|
| 38351230 | Full-length single-molecule protein fingerprinting | Filius M | 2024 Feb 13 |
|
| 38347213 | O-GlcNAc forces an α-synuclein amyloid strain with notably diminished seeding and pathology | Balana AT | 2024 Feb 12 |
|
| 38345749 | O-GlcNAcylation of TRIM29 and OGT translation forms a feedback loop to promote adaptive response of PDAC cells to glucose deficiency | Zhao FY | 2024 Feb 12 |
|
| 38336962 | Effect of carbohydrates on the adhesion of Bordetella bronchiseptica to the respiratory epithelium in rabbits | Patiño P | 2024 Feb 10 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Dynamic glycosylation of the transcription factor CREB: a potential role in gene regulation. |
|
J Am Chem Soc | 2003 Jun 4 | 12769553 |
| Effect of okadaic acid on O-linked N-acetylglucosamine levels in a neuroblastoma cell line. |
|
Biochim Biophys Acta | 1999 Oct 18 | 10572927 |
| Regulation of a cytosolic and nuclear O-GlcNAc transferase. Role of the tetratricopeptide repeats. |
|
J Biol Chem | 1999 Nov 5 | 10542233 |
| An N-terminal region of Sp1 targets its proteasome-dependent degradation in vitro. |
|
J Biol Chem | 1999 May 21 | 10329728 |
| Vertebrate lens alpha-crystallins are modified by O-linked N-acetylglucosamine. |
|
J Biol Chem | 1992 Jan 5 | 1730617 |
