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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GlycoNAVI
- G49108TO
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9Z2V6 | Histone deacetylase 5 | ||
| Q9Z2W9 | Glutamate receptor 3 | ||
| Q9Z2Y3 | Homer protein homolog 1 | ||
| Q9Z327 | Synaptopodin | ||
| Q9Z351 | Potassium voltage-gated channel subfamily KQT member 2 | ||
| Q9ZTX8 | Auxin response factor 6 | ||
| Q9ZU48 | Expressed protein | ||
| Q9ZUL3 | Protein indeterminate-domain 5, chloroplastic | ||
| Q9ZVI3 | KH domain-containing protein At2g38610 | ||
| S4R1M9 | Oxysterol-binding protein-related protein 10 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O152 | Escherichia coli |
| E.coli O156 | Escherichia coli |
| E.coli O158ac | Escherichia coli |
| E.coli O159 | Escherichia coli |
| E.coli O160 | Escherichia coli |
| E.coli O161 | Escherichia coli |
| E.coli O167 | Escherichia coli |
| E.coli O168 | Escherichia coli |
| E.coli O16H48K12 | Escherichia coli |
| E.coli O170 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 34726172 | The structure of natively iodinated bovine thyroglobulin | Kim K | 2021 Oct 29 |
|
| 34795873 | Identification of gp120 Residue His105 as a Novel Target for HIV-1 Neutralization by Small-Molecule CD4-Mimics | Fritschi CJ | 2021 Oct 29 |
|
| 34570911 | Design, Synthesis and Structural Analysis of Glucocerebrosidase Imaging Agents | Rowland RJ | 2021 Oct 29 |
|
| 34715022 | Pan-ebolavirus protective therapy by two multifunctional human antibodies | Gilchuk P | 2021 Oct 28 |
|
| 33974006 | GlcNAc is a mast-cell chromatin-remodeling oncometabolite that promotes systemic mastocytosis aggressiveness | Agopian J | 2021 Oct 28 |
|
| 34709351 | HVEM structures and mutants reveal distinct functions of binding to LIGHT and BTLA/CD160 | Liu W | 2021 Oct 28 |
|
| 34705256 | O-GlcNAc Transferase (OGT) Protects Cerebral Neurons from Death During Ischemia/Reperfusion (I/R) Injury by Modulating Drp1 in Mice | Zhao J | 2021 Oct 27 |
|
| 34707294 | Dispatched uses Na+ flux to power release of lipid-modified Hedgehog | Wang Q | 2021 Oct 27 |
|
| 34655519 | Structural mechanism of SARS-CoV-2 neutralization by two murine antibodies targeting the RBD | Errico JM | 2021 Oct 26 |
|
| 34697307 | Antibody elicited by HIV-1 immunogen vaccination in macaques displaces Env fusion peptide and destroys a neutralizing epitope | Abernathy ME | 2021 Oct 25 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Phosphorylation activates master growth regulator DELLA by promoting histone H2A binding at chromatin in Arabidopsis. |
|
Nat Commun | 2024 Sep 3 | 39227587 |
| A protein O-GlcNAc glycosyltransferase regulates the antioxidative response in Yersinia pestis. |
|
Nat Commun | 2024 Aug 16 | 39152136 |
| Polη O-GlcNAcylation governs genome integrity during translesion DNA synthesis. |
|
Nat Commun | 2017 Dec 5 | 29208956 |
| Epithelial Mesenchymal Transition Induces Aberrant Glycosylation through Hexosamine Biosynthetic Pathway Activation. |
|
J Biol Chem | 2016 Jun 17 | 27129262 |
| The making of a sweet modification: structure and function of O-GlcNAc transferase. |
|
J Biol Chem | 2014 Dec 12 | 25336649 |
