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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GlycoNAVI
- G49108TO
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9Z2V6 | Histone deacetylase 5 | ||
| Q9Z2W9 | Glutamate receptor 3 | ||
| Q9Z2Y3 | Homer protein homolog 1 | ||
| Q9Z327 | Synaptopodin | ||
| Q9Z351 | Potassium voltage-gated channel subfamily KQT member 2 | ||
| Q9ZTX8 | Auxin response factor 6 | ||
| Q9ZU48 | Expressed protein | ||
| Q9ZUL3 | Protein indeterminate-domain 5, chloroplastic | ||
| Q9ZVI3 | KH domain-containing protein At2g38610 | ||
| S4R1M9 | Oxysterol-binding protein-related protein 10 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O1A | Escherichia coli |
| E.coli O1A1 | Escherichia coli |
| E.coli O1B | Escherichia coli |
| E.coli O1C | Escherichia coli |
| E.coli O2 | Escherichia coli |
| E.coli O21 | Escherichia coli |
| E.coli O23A | Escherichia coli |
| E.coli O25 | Escherichia coli |
| E.coli O26 | Escherichia coli |
| E.coli O27 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 34687415 | Enhancement of photocatalytic and biological activities of chitosan/activated carbon incorporated with TiO2 nanoparticles | Owda ME | 2021 Oct 23 |
|
| 34693228 | Structural insights into the cis and trans assembly of human trophoblast cell surface antigen 2 | Sun M | 2021 Oct 22 |
|
| 34671049 | Molecular insights into receptor binding of recent emerging SARS-CoV-2 variants | Han P | 2021 Oct 20 |
|
| 34726173 | Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins | Kim DG | 2021 Oct 20 |
|
| 34519517 | Bispecific antibodies targeting distinct regions of the spike protein potently neutralize SARS-CoV-2 variants of concern | Cho H | 2021 Oct 20 |
|
| 34668190 | OGT upregulates myogenic IL-6 by mediating O-GlcNAcylation of p65 in mouse skeletal muscle under cold exposure | Hu Y | 2021 Oct 19 |
|
| 34667181 | Altered protein O-GlcNAcylation in placentas from mothers with diabetes causes aberrant endocytosis in placental trophoblast cells | Palin V | 2021 Oct 19 |
|
| 34667172 | Structural basis of soluble membrane attack complex packaging for clearance | Menny A | 2021 Oct 19 |
|
| 34596182 | Synthesis and evaluation of peptidic thrombin inhibitors bearing acid-stable sulfotyrosine analogues | Dowman LJ | 2021 Oct 19 |
|
| 34686333 | ROR and RYK extracellular region structures suggest that receptor tyrosine kinases have distinct WNT-recognition modes | Shi F | 2021 Oct 19 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Phosphorylation activates master growth regulator DELLA by promoting histone H2A binding at chromatin in Arabidopsis. |
|
Nat Commun | 2024 Sep 3 | 39227587 |
| A protein O-GlcNAc glycosyltransferase regulates the antioxidative response in Yersinia pestis. |
|
Nat Commun | 2024 Aug 16 | 39152136 |
| Polη O-GlcNAcylation governs genome integrity during translesion DNA synthesis. |
|
Nat Commun | 2017 Dec 5 | 29208956 |
| Epithelial Mesenchymal Transition Induces Aberrant Glycosylation through Hexosamine Biosynthetic Pathway Activation. |
|
J Biol Chem | 2016 Jun 17 | 27129262 |
| The making of a sweet modification: structure and function of O-GlcNAc transferase. |
|
J Biol Chem | 2014 Dec 12 | 25336649 |
