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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9JIS7 | Voltage-dependent L-type calcium channel subunit alpha-1F | ||
| Q9JIY2 | E3 ubiquitin-protein ligase Hakai | ||
| Q9JJ43 | RNA binding protein fox-1 homolog 1 | ||
| Q9JJV5 | Voltage-dependent calcium channel gamma-3 subunit | ||
| Q9JK84 | Partitioning defective 6 homolog gamma | ||
| Q9JKD3 | Secretory carrier-associated membrane protein 5 | ||
| Q9JKK7 | Tropomodulin-2 | ||
| Q9JKR6 | Hypoxia up-regulated protein 1 | ||
| Q9JKS4 | LIM domain-binding protein 3 | ||
| Q9JKV1 | Proteasomal ubiquitin receptor ADRM1 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Antimicrobial peptides | Drosophila melanogaster |
| Antimicrobial peptides | Rattus norvegicus |
| Antimicrobial peptides | Danio rerio |
| Antimicrobial peptides | Xenopus tropicalis |
| Antimicrobial peptides | Gallus gallus |
| Antimicrobial peptides | Homo sapiens |
| Antimicrobial peptides | Canis familiaris |
| Antimicrobial peptides | Dictyostelium discoideum |
| Antimicrobial peptides | Bos taurus |
| Antimicrobial peptides | Mus musculus |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 36499311 | Insights into the Structure of the Highly Glycosylated Ffase from Rhodotorula dairenensis Enhance Its Biotechnological Potential | Jiménez-Ortega E | 2022 Nov 29 |
|
| 36442096 | Human T cells recognize HLA-DP–bound peptides in two orientations | Klobuch S | 2022 Nov 29 |
|
| 36096412 | Glycosylation of immunoglobin G in tumors: Function, regulation and clinical implications | Yang S | 2022 Nov 28 |
|
| 36224515 | Inside Back Cover: A Sensitive and Reversible Labeling Strategy Enables Global Mapping of the Core‐Fucosylated Glycoproteome on Cell Surfaces (Angew. Chem. Int. Ed. 49/2022) | Tian Y | 2022 Nov 28 |
|
| 36551191 | O-GlcNAc-Mediated Regulation of Galectin Expression and Secretion in Human Promyelocytic HL-60 Cells Undergoing Neutrophilic Differentiation | McTague A | 2022 Nov 27 |
|
| 36435935 | Molecular basis for glycan recognition and reaction priming of eukaryotic oligosaccharyltransferase | Ramírez AS | 2022 Nov 26 |
|
| 36435827 | Structural characterization of protective non-neutralizing antibodies targeting Crimean-Congo hemorrhagic fever virus | Durie IA | 2022 Nov 26 |
|
| 36351028 | Cryo-EM structure of the C-terminal domain of the human sodium-chloride cotransporter | Nan J | 2022 Nov 23 |
|
| 36417532 | The free fatty acid–binding pocket is a conserved hallmark in pathogenic β-coronavirus spike proteins from SARS-CoV to Omicron | Toelzer C | 2022 Nov 23 |
|
| 36411391 | A potent and broad neutralization of SARS-CoV-2 variants of concern by DARPins | Chonira V | 2022 Nov 21 |
|
PubAnnotation
