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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O54990 | Prominin-1 | ||
| O54992 | MAP kinase-activated protein kinase 5 | ||
| O55017 | Voltage-dependent N-type calcium channel subunit alpha-1B | ||
| O55028 | Branched-chain alpha-ketoacid dehydrogenase kinase | ||
| O55042 | Alpha-synuclein | ||
| O55098 | Serine/threonine-protein kinase 10 | ||
| O55106 | Striatin | ||
| O55111 | Desmoglein-2 | ||
| O55135 | Eukaryotic translation initiation factor 6 | ||
| O55143 | Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Antimicrobial peptides | Drosophila melanogaster |
| Antimicrobial peptides | Rattus norvegicus |
| Antimicrobial peptides | Danio rerio |
| Antimicrobial peptides | Xenopus tropicalis |
| Antimicrobial peptides | Gallus gallus |
| Antimicrobial peptides | Homo sapiens |
| Antimicrobial peptides | Canis familiaris |
| Antimicrobial peptides | Dictyostelium discoideum |
| Antimicrobial peptides | Bos taurus |
| Antimicrobial peptides | Mus musculus |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 36261433 | Helical ultrastructure of the metalloprotease meprin α in complex with a small molecule inhibitor | Bayly-Jones C | 2022 Oct 19 |
|
| 36257932 | Structure of the proteolytic enzyme PAPP-A with the endogenous inhibitor stanniocalcin-2 reveals its inhibitory mechanism | Kobberø SD | 2022 Oct 18 |
|
| 36254612 | The Inflammation Biomarker GlycA Reflects Plasma N-Glycan Branching | Noel M | 2022 Oct 18 |
|
| 36261006 | Structural basis of activation and antagonism of receptor signaling mediated by interleukin-27 | Składanowska K | 2022 Oct 18 |
|
| 36260993 | IL-17-induced dimerization of IL-17RA drives the formation of the IL-17 signalosome to potentiate signaling | Goepfert A | 2022 Oct 18 |
|
| 36293310 | Mutation Hotspot for Changing the Substrate Specificity of β-N-Acetylhexosaminidase: A Library of GlcNAcases | Nekvasilová P | 2022 Oct 18 |
|
| 36251573 | Sebetralstat (KVD900): A Potent and Selective Small Molecule Plasma Kallikrein Inhibitor Featuring a Novel P1 Group as a Potential Oral On-Demand Treatment for Hereditary Angioedema | Davie RL | 2022 Oct 17 |
|
| 36253376 | HIV-1 CD4-binding site germline antibody–Env structures inform vaccine design | Dam KA | 2022 Oct 17 |
|
| 36192063 | Sialic acid linkage-specific quantitative N-glycoproteomics using selective alkylamidation and multiplex TMT-labeling | Yang H | 2022 Oct 16 |
|
| 35964676 | Ligand-mediated Structural Dynamics of a Mammalian Pancreatic KATP Channel | Sung MW | 2022 Oct 15 |
|
PubAnnotation
