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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O82595 | B3 domain-containing transcription factor NGA4 | ||
| O82762 | F17H15.1/F17H15.1 | ||
| O88307 | Sortilin-related receptor | ||
| O88329 | Unconventional myosin-Ia | ||
| O88351 | Inhibitor of nuclear factor kappa-B kinase subunit beta | ||
| O88379 | Bromodomain adjacent to zinc finger domain protein 1A | ||
| O88466 | Zinc finger protein 106 | ||
| O88491 | Histone-lysine N-methyltransferase, H3 lysine-36 specific | ||
| O88492 | Perilipin-4 | ||
| O88495 | Melatonin-related receptor |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| Antimicrobial peptides | Drosophila melanogaster |
| Antimicrobial peptides | Rattus norvegicus |
| Antimicrobial peptides | Danio rerio |
| Antimicrobial peptides | Xenopus tropicalis |
| Antimicrobial peptides | Gallus gallus |
| Antimicrobial peptides | Homo sapiens |
| Antimicrobial peptides | Canis familiaris |
| Antimicrobial peptides | Dictyostelium discoideum |
| Antimicrobial peptides | Bos taurus |
| Antimicrobial peptides | Mus musculus |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 37828292 | Experimental phasing opportunities for macromolecular crystallography at very long wavelengths | El Omari K | 2023 Oct 12 |
|
| 37904282 | Author response for 'Structural insights into the inhibitory mechanism of angiotensin‐I‐converting enzyme by the lactotripeptides IPP and VPP' | Kyle S | 2023 Oct 12 |
|
| 37818702 | <scp>Aspergillus oryzae</scp> α‐<scp>l</scp>‐rhamnosidase: Crystal structure and insight into the substrate specificity | Makabe K | 2023 Oct 11 |
|
| 37817319 | O-GlcNAcylation of TLR4 inhibits osteogenic differentiation of periodontal ligament stem cells | Yu B | 2023 Oct 10 |
|
| 37910430 | Author Response: Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect akuBGL activity | Sun X | 2023 Oct 10 |
|
| 37969138 | Human O-GlcNAcase Uses a Preactivated Boat-skew Substrate Conformation for Catalysis. Evidence from X-ray Crystallography and QM/MM Metadynamics | Calvelo M | 2023 Oct 10 |
|
| 37800479 | Crystal Structure of Fungal Nonspecific Phospholipase C Unveils a Distinct Catalytic Mechanism | Feng C | 2023 Oct 06 |
|
| 37797083 | Superiority of the Triple-Acting 5-HT6R/5-HT3R Antagonist and MAO-B Reversible Inhibitor PZ-1922 over 5-HT6R Antagonist Intepirdine in Alleviation of Cognitive Deficits in Rats | Grychowska K | 2023 Oct 05 |
|
| 37791598 | APOE Christchurch‐mimetic therapeutic antibody reduces APOE‐mediated toxicity and tau phosphorylation | Marino C | 2023 Oct 04 |
|
| 37750556 | Sustained Increases in Cardiomyocyte Protein O ‐Linked β‐N‐Acetylglucosamine Levels Lead to Cardiac Hypertrophy and Reduced Mitochondrial Function Without Systolic Contractile Impairment | Ha CM | 2023 Oct 03 |
|
PubAnnotation
