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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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GALAXY
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G61751GZ
Summary
- GlyTouCan ID
-
G61751GZ
- IUPAC Condensed
- GlcNAc(b1-2)Man(a1-3)[Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc(b1-
- Motifs
- N-Glycan core basic
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 1113.41
G42680EX
G63411NB
3D Structures
- GlycoNAVI
- G61751GZ
- GlycoShape
- G61751GZ
- GLYCAM
- DGlcpNAcb1-2DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-OH
Organisms
| Organisms | Evidence |
|---|---|
| Lithobates pipiens (northern leopard frog) |
Taxonomic Hierarchy
root
cellular organisms [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| MGAT4B | UDP-GlcNAc |
G61751GZ
|
PA |
G92024SL
|
PA | |
| MGAT4B | UDP-GlcNAc |
G61751GZ
|
Asn |
G92024SL
|
Asn | |
| MGAT2 | UDP-GlcNAc |
G61751GZ
|
Asn-Xaa |
G39213VZ
|
Asn-Xaa | |
| MGAT4A | UDP-GlcNAc |
G61751GZ
|
PA |
G92024SL
|
PA |
KEGG BRITE Database
G08520NM
G07483YN
GALAXY
Glucose Units
- ODS
- 7.4
- Amide
- 4.7
- Degrading Enzymes
G96337NG
G39089YD
G69411IG
G22768VO
Glycans containing this structure in GALAXY
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O24103 | S3 ribonuclease (Fragment) | ||
| P01579 | Interferon gamma | ||
| P01876 | Immunoglobulin heavy constant alpha 1 | ||
| P02699 | Rhodopsin | ||
| P02787 | Serotransferrin | ||
| P04007 | Ribonuclease S-2 | ||
| P08100 | Rhodopsin | ||
| P31355 | Rhodopsin | ||
| Q40379 | Ribonuclease S-6 | ||
| Q40381 | Ribonuclease S-7 |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:a-dman-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:5o(6+1)9d
- WURCS
- WURCS=2.0/3,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-1-3/a4-b1_b4-c1_c3-d1_c6-f1_d2-e1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 33139572 | Spatial and temporal diversity of glycome expression in mammalian brain | Lee Jua | 2020-11-17 |
|
| 33004438 | Characterizing human α-1,6-fucosyltransferase (FUT8) substrate specificity and structural similarities with related fucosyltransferases | Boruah BM | 2020 Dec 11 |
|
| 30206174 | Structural Basis of Pan-Ebolavirus Neutralization by a Human Antibody against a Conserved, yet Cryptic Epitope | West BR | 2018 Nov 07 |
|
| 20131323 | Identification of N-glycans from Ebola virus glycoproteins by matrix-assisted laser desorption/ionisation time-of-flight and negative ion electrospray tandem mass spectrometry | Ritchie G | 2010 Feb 03 |
|
| 18615077 | Structure of the Ebola virus glycoprotein bound to an antibody from a human survivor | Lee JE | 2008 Jul 10 |
|
| 17006639 | Kinetic properties and substrate specificities of two recombinant human N-acetylglucosaminyltransferase-IV isozymes | Oguri S | 2006 Nov |
|
| 11469797 | The widespread effect of beta 1,4-galactosyltransferase on N-glycan processing | Fukuta K | 2001 Aug 01 |
|
| 10929010 | N-glycan patterns of human transferrin produced in Trichoplusia ni insect cells: effects of mammalian galactosyltransferase | Ailor E | 2000 Aug |
|
| 10372966 | A novel second isoenzyme of the human UDP-N-acetylglucosamine:alpha1,3-D-mannoside beta1,4-N-acetylglucosaminyltransferase family: cDNA cloning, expression, and chromosomal assignment | Yoshida A | 1998 Dec |
|
| 9083032 | Differential N-glycan patterns of secreted and intracellular IgG produced in Trichoplusia ni cells | Hsu TA | 1997 Apr 4 |
|
