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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
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GALAXY
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MIRAGE
G10219AA
Summary
- GlyTouCan ID
-
G10219AA
- IUPAC Condensed
- GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-2)[GlcNAc(b1-6)]Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc(b1-
- Motifs
- N-Glycan complex
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 1519.57
G81253FL
G23849BG
3D Structures
- GlycoNAVI
- G10219AA
- GlycoShape
- G10219AA
- GLYCAM
- DGlcpNAcb1-2DManpa1-3[DGlcpNAcb1-2[DGlcpNAcb1-6]DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-OH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Homo sapiens (human) |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| MGAT5B | UDP-GlcNAc |
G39213VZ
|
Asn-X |
G10219AA
|
Asn-X | |
| MGAT4B | UDP-GlcNAc |
G10219AA
|
PA |
G20030CU
|
PA | |
| MGAT4A | UDP-GlcNAc |
G10219AA
|
PA |
G20030CU
|
PA | |
| MGAT5 | UDP-GlcNAc |
G39213VZ
|
Asn-X |
G10219AA
|
Asn-X |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| MGAT5 | UDP-GlcNAc |
G39213VZ
|
[beta]1-Asn |
G10219AA
|
[beta]1-Asn | |
| MGAT5B | UDP-GlcNAc |
G39213VZ
|
Asn-X |
G10219AA
|
Asn-X | |
| MGAT4B | UDP-GlcNAc |
G10219AA
|
PA |
G20030CU
|
PA | |
| MGAT5 | UDP-GlcNAc |
G39213VZ
|
Asialo-galacto-biantennary |
G10219AA
|
Asialo-galacto-biantennary | |
| MGAT4A | UDP-GlcNAc |
G10219AA
|
PA |
G20030CU
|
PA |
KEGG BRITE Database
G83717YJ
GALAXY
Glucose Units
- ODS
- 7.3
- Amide
- 5.8
- Degrading Enzymes
G69947ZY
G80393PG
G79809MM
G78803YD
G34175ZP
Glycans containing this structure in GALAXY
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P01579 | Interferon gamma | ||
| P01854 | Immunoglobulin heavy constant epsilon |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:a-dman-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:b-dglc-HEX-1:5 13s:n-acetyl LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:5o(6+1)9d 9:9o(2+1)10d 10:10d(2+1)11n 11:9o(6+1)12d 12:12d(2+1)13n
- WURCS
- WURCS=2.0/3,8,7/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-1-3-1-1/a4-b1_b4-c1_c3-d1_c6-f1_d2-e1_f2-g1_f6-h1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 33139572 | Spatial and temporal diversity of glycome expression in mammalian brain | Lee Jua | 2020-11-17 |
|
| 20131323 | Identification of N-glycans from Ebola virus glycoproteins by matrix-assisted laser desorption/ionisation time-of-flight and negative ion electrospray tandem mass spectrometry | Ritchie G | 2010 Feb 03 |
|
| 19846580 | Comparison of the substrate specificities and catalytic properties of the sister N-acetylglucosaminyltransferases, GnT-V and GnT-Vb (IX) | Alvarez-Manilla G | 2009 Oct 20 |
|
| 17006639 | Kinetic properties and substrate specificities of two recombinant human N-acetylglucosaminyltransferase-IV isozymes | Oguri S | 2006 Nov |
|
| 12941944 | Molecular cloning and characterization of human GnT-IX, a novel beta1,6-N-acetylglucosaminyltransferase that is specifically expressed in the brain | Inamori K | 2003 Oct 31 |
|
| 11469797 | The widespread effect of beta 1,4-galactosyltransferase on N-glycan processing | Fukuta K | 2001 Aug 01 |
|
| 10024668 | Tissue specific expression and chromosomal mapping of a human UDP-N-acetylglucosamine: alpha1,3-d-mannoside beta1, 4-N-acetylglucosaminyltransferase | Yoshida A | 1999 Mar 01 |
|
| 6216250 | A mouse lymphoma cell line resistant to the leukoagglutinating lectin from Phaseolus vulgaris is deficient in UDP-GlcNAc: alpha-D-mannoside beta 1,6 N-acetylglucosaminyltransferase. | Cummings RD | 1982 Nov 25 |
|
