Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
GlycanBuilder
Glycan Converters
GlycoMaple
GlycomeAtlas
LM-GlycomeAtlas
GALAXY
MCAW
GlycoSim
GRable
Guidelines
MIRAGE
G49108TO
Summary
- GlyTouCan ID
-
G49108TO
- IUPAC Condensed
- GlcNAc(b1-
3D Structures
- GlycoNAVI
- G49108TO
- GLYCAM
- DGlcpNAcb1-OH
G14843DJ
G68544GH
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Drosophila melanogaster (fruit fly) | |
| Streptococcus pneumoniae |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT2 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT1 | UDP-Gal |
G49108TO
|
R |
G00055MO
|
R | |
| B3GALT5 | UDP-Gal |
G49108TO
|
R |
G00056MO
|
R |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| B4GALT5 | (not applicable) |
G49108TO
|
[beta]-S-pNP |
G00055MO
|
[beta]-S-pNP | |
| B4GALT3 | UDP-Gal |
G49108TO
|
Benzyl-[beta] |
G00055MO
|
Benzyl-[beta] | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-Benzl |
G00055MO
|
[beta]-1-Benzl | |
| B3GALT2 | UDP-Gal |
G49108TO
|
Lemieux |
G00056MO
|
Lemieux | |
| B4GALT4 | UDP-Gal |
G49108TO
|
[beta]-1-4-methyl-umbelliferyl |
G00055MO
|
[beta]-1-4-methyl-umbelliferyl |
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9Z2G6 | Protein sel-1 homolog 1 | ||
| Q9Z2H2 | Regulator of G-protein signaling 6 | ||
| Q9Z2H5 | Band 4.1-like protein 1 | ||
| Q9Z2I9 | Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial | ||
| Q9Z2L0 | Non-selective voltage-gated ion channel VDAC1 | ||
| Q9Z2Q5 | Large ribosomal subunit protein mL40 | ||
| Q9Z2U0 | Proteasome subunit alpha type-7 | ||
| Q9Z2U1 | Proteasome subunit alpha type-5 | ||
| Q9Z2U2 | Zinc finger protein 292 | ||
| Q9Z2V5 | Histone deacetylase 6 |
GlycoEpitope
- Epitope ID
- EP0004
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O152 | Escherichia coli |
| E.coli O156 | Escherichia coli |
| E.coli O158ac | Escherichia coli |
| E.coli O159 | Escherichia coli |
| E.coli O160 | Escherichia coli |
| E.coli O161 | Escherichia coli |
| E.coli O167 | Escherichia coli |
| E.coli O168 | Escherichia coli |
| E.coli O16H48K12 | Escherichia coli |
| E.coli O170 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2122h-1b_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 37544422 | A novel Toll-like receptor 7/8–specific antagonist E6742 ameliorates clinically relevant disease parameters in murine models of lupus | Ishizaka ST | 2023 Oct 15 |
|
| 37838775 | EOGT enables residual Notch signaling in mouse intestinal cells lacking POFUT1 | Nauman M | 2023 Oct 14 |
|
| 37828292 | Experimental phasing opportunities for macromolecular crystallography at very long wavelengths | El Omari K | 2023 Oct 12 |
|
| 37904282 | Author response for 'Structural insights into the inhibitory mechanism of angiotensin‐I‐converting enzyme by the lactotripeptides IPP and VPP' | Kyle S | 2023 Oct 12 |
|
| 37818702 | <scp>Aspergillus oryzae</scp> α‐<scp>l</scp>‐rhamnosidase: Crystal structure and insight into the substrate specificity | Makabe K | 2023 Oct 11 |
|
| 37817319 | O-GlcNAcylation of TLR4 inhibits osteogenic differentiation of periodontal ligament stem cells | Yu B | 2023 Oct 10 |
|
| 37910430 | Author Response: Structural basis of EHEP-mediated offense against phlorotannin-induced defense from brown algae to protect akuBGL activity | Sun X | 2023 Oct 10 |
|
| 37969138 | Human O-GlcNAcase Uses a Preactivated Boat-skew Substrate Conformation for Catalysis. Evidence from X-ray Crystallography and QM/MM Metadynamics | Calvelo M | 2023 Oct 10 |
|
| 37800479 | Crystal Structure of Fungal Nonspecific Phospholipase C Unveils a Distinct Catalytic Mechanism | Feng C | 2023 Oct 06 |
|
| 37797083 | Superiority of the Triple-Acting 5-HT6R/5-HT3R Antagonist and MAO-B Reversible Inhibitor PZ-1922 over 5-HT6R Antagonist Intepirdine in Alleviation of Cognitive Deficits in Rats | Grychowska K | 2023 Oct 05 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Phosphorylation activates master growth regulator DELLA by promoting histone H2A binding at chromatin in Arabidopsis. |
|
Nat Commun | 2024 Sep 3 | 39227587 |
| A protein O-GlcNAc glycosyltransferase regulates the antioxidative response in Yersinia pestis. |
|
Nat Commun | 2024 Aug 16 | 39152136 |
| Polη O-GlcNAcylation governs genome integrity during translesion DNA synthesis. |
|
Nat Commun | 2017 Dec 5 | 29208956 |
| Epithelial Mesenchymal Transition Induces Aberrant Glycosylation through Hexosamine Biosynthetic Pathway Activation. |
|
J Biol Chem | 2016 Jun 17 | 27129262 |
| The making of a sweet modification: structure and function of O-GlcNAc transferase. |
|
J Biol Chem | 2014 Dec 12 | 25336649 |
