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GlyTouCan
Glycan Structure Repository
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Repository for lectin-assisted multimodality data
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G57818FI
Summary
- GlyTouCan ID
-
G57818FI
- IUPAC Condensed
- Gal(?1-?)GlcNAc(?1-?)Man(a1-3)[Gal(?1-?)GlcNAc(?1-?)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc(b1-
- Motifs
- N-Glycan core basic
- Subsumption Level
- Linkage-defined saccharide
- Monoisotopic Mass
- 1786.65
3D Structures
GlycoShape
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Severe acute respiratory syndrome coronavirus 2 | |
| Homo sapiens (human) |
Taxonomic Hierarchy
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O00300 | Tumor necrosis factor receptor superfamily member 11B | ||
| O00391 | Sulfhydryl oxidase 1 | ||
| O15204 | ADAM DEC1 | ||
| O15389 | Sialic acid-binding Ig-like lectin 5 | ||
| O75888 | Tumor necrosis factor ligand superfamily member 13 | ||
| P00738 | Haptoglobin | ||
| P01011 | Alpha-1-antichymotrypsin | ||
| P01019 | Angiotensinogen | ||
| P01033 | Metalloproteinase inhibitor 1 | ||
| P01591 | Immunoglobulin J chain |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:x-dglc-HEX-1:5 8b:x-dgal-HEX-1:5 9s:n-acetyl 10b:a-dman-HEX-1:5 11b:x-dglc-HEX-1:5 12b:x-dgal-HEX-1:5 13s:n-acetyl 14b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(-1+1)7d 7:7o(-1+1)8d 8:7d(2+1)9n 9:5o(6+1)10d 10:10o(-1+1)11d 11:11o(-1+1)12d 12:11d(2+1)13n 13:1o(6+1)14d
- WURCS
- WURCS=2.0/6,10,9/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2122h-1x_1-5_2*NCC/3=O][a2112h-1x_1-5][a1221m-1a_1-5]/1-1-2-3-4-5-3-4-5-6/a4-b1_a6-j1_b4-c1_c3-d1_c6-g1_d?-e1_e?-f1_g?-h1_h?-i1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 11231274 | A comparative study of the asparagine-linked oligosaccharides on siglec-5, siglec-7 and siglec-8, expressed in a CHO cell line, and their contribution to ligand recognition | Freeman S | 2001 Mar |
|
| 10200178 | Site-specific characterization of the N-linked glycans of murine prion protein by high-performance liquid chromatography/electrospray mass spectrometry and exoglycosidase digestions | Stimson E | 1999 Apr 13 |
|
