Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
GlycanBuilder
Glycan Converters
GlycoMaple
GlycomeAtlas
LM-GlycomeAtlas
GALAXY
MCAW
GlycoSim
GRable
Guidelines
MIRAGE
G63334FZ
Summary
- GlyTouCan ID
-
G63334FZ
- IUPAC Condensed
- GlcNAc(b1-3)[Neu5Ac(a2-6)]GalNAc(a1-
- Motifs
- O-Glycan core 3 Sialyl Tn antigen
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 715.26
G71222KY
G11589YK
3D Structures
- GlycoShape
- G63334FZ
- GLYCAM
- DGlcpNAcb1-3[Neup5Aca2-6]DGalpNAca1-OH
Organisms
| Organisms | Evidence |
|---|---|
| Homo sapiens (human) | |
| Danio rerio (zebrafish) |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| ST6GALNAC1 | CMP-Neu5Ac |
G00035MO
|
O-glycan Synthesis |
G63334FZ
|
O-glycan Synthesis | |
| B4GALT1 | UDP-Gal |
G63334FZ
|
O-glycan Synthesis |
G25780HH
|
O-glycan Synthesis | |
| B3GALT5 | UDP-Gal |
G63334FZ
|
O-glycan Synthesis |
G19749DC
|
O-glycan Synthesis |
Core Protein
GlycomeAtlas
Tissues in which this glycan is expressed are highlighted in yellow.
- Danio rerio
Literature
- Tissue
-
- gill
- Reference
- Yamakawa N et al. Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns. Nat Commun. 2018;9(1):4647. Published 2018 Nov 7. doi:10.1038/s41467-018-06950-3
- DOI
- 10.1038/s41467-018-06950-3
Localization sites organized by hierarchy by Uber-anatomy ontology (UBERON)
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 6s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3d(2+1)4n 4:1o(6+2)5d 5:5d(5+1)6n
- WURCS
- WURCS=2.0/3,3,2/[a2112h-1a_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3/a3-b1_a6-c2
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 30405127 | Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns | Yamakawa N | 2018 Nov 07 |
|
| 8054719 | Structures of monosialyl oligosaccharides isolated from the respiratory mucins of a non-secretor (O, Lea+b-) patient suffering from chronic bronchitis. Characterization of a novel type of mucin carbohydrate core structure | van Halbeek H | 1994 Apr |
|
| 1627559 | The broad diversity of neutral and sialylated oligosaccharides derived from human salivary mucins | Klein A | 1992 Jul 7 |
|
| 2731547 | Structures of O-glycosidically linked oligosaccharides isolated from human meconium glycoproteins | Capon C | 1989 Jun 1 |
|
| 3191924 | Isolation and structural characterization of low-molecular-mass monosialyl oligosaccharides derived from respiratory-mucus glycoproteins of a patient suffering from bronchiectasis | Van Halbeek H | 1988 Nov 1 |
|
| 4008490 | Oligosaccharide structures of human colonic mucin | Podolsky DK | 1985 Jul 15 |
|
| 4066681 | Oligosaccharide structures of isolated human colonic mucin species | Podolsky DK | 1985 Dec 15 |
|
| 6619131 | Structures of the major oligosaccharides from a human rectal adenocarcinoma glycoprotein | Kurosaka A | 1983 Oct 10 |
|
