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GlyTouCan
Glycan Structure Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G65562ZE
Summary
- GlyTouCan ID
-
G65562ZE
- IUPAC Condensed
- Neu5Ac(a2-3)Gal(b1-3)GalNAc(a1-
- Motifs
- Sialyl T antigen
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 674.24
External Links
- GlyConnect structure
- GlyGen
- ChEBI
- PubChem Compound
- PubChem Substance
- CarbBank
3D Structures
G72008IY
G02684WR
Organisms
| Organisms | Evidence |
|---|---|
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
R |
G01614ZM
|
R | |
| ST6GALNAC2 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST3GAL1 | CMP-Neu5Ac |
G00031MO
|
Thr |
G65562ZE
|
Thr |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| ST6GALNAC1 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST6GALNAC3 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST3GAL3 | CMP-Neu5Ac |
G00031MO
|
free |
G65562ZE
|
free | |
| ST3GAL2 | CMP-Neu5Ac |
G00031MO
|
R |
G65562ZE
|
R | |
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr |
KEGG BRITE Database
Core Protein
GlycomeAtlas
Tissues in which this glycan is expressed are highlighted in yellow.
- Danio rerio
Literature
- Tissue
-
- heart
- intestine
- liver
- Reference
- Yamakawa N et al. Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns. Nat Commun. 2018;9(1):4647. Published 2018 Nov 7. doi:10.1038/s41467-018-06950-3
- DOI
- 10.1038/s41467-018-06950-3
Localization sites organized by hierarchy by Uber-anatomy ontology (UBERON)
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 5s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+2)4d 4:4d(5+1)5n
- WURCS
- WURCS=2.0/3,3,2/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3/a3-b1_b3-c2
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 10381349 | Impaired galactosylation of core 2 O-glycans in erythrocytes of beta1,4-galactosyltransferase knockout mice | Kotani N | 1999 Jun 24 |
|
| 9719680 | Characterization of SPACR, a sialoprotein associated with cones and rods present in the interphotoreceptor matrix of the human retina: immunological and lectin binding analysis | Acharya S | 1998 Oct |
|
| 9751792 | Expression of N-linked sialyl Le(x) determinants and O-glycans in the carbohydrate moiety of human amniotic fluid transferrin during pregnancy | van Rooijen JJ | 1998 Nov |
|
| 9442070 | The Glycosylation and Structure of Human Serum IgA1, Fab, and Fc Regions and the Role of N-Glycosylation on Fcα Receptor Interactions | Mattu TS | 1998 Jan 23 |
|
| 9530955 | Purification and characterization of the MUC1 mucin-type glycoprotein, epitectin, from human urine: structures of the major oligosaccharide alditols | Bhavanandan VP | 1998 Jan |
|
| 9852066 | Phosphorylation and O-Glycosylation Sites of Human Chromogranin A (CGA79–439) from Urine of Patients with Carcinoid Tumors | Gadroy P | 1998 Dec 18 |
|
| 9538010 | Human Low-Molecular-Weight Salivary Mucin Expresses the Sialyl Lewisx Determinant and Has L-Selectin Ligand Activity | Prakobphol A | 1998 Apr 7 |
|
| 9054441 | Evidence for a Novel O-Linked Sialylated Trisaccharide on Ser-248 of Human Plasminogen 2 | Pirie-Shepherd SR | 1997 Mar 14 |
|
| 9118998 | Glycosylation analysis and protein structure determination of murine fetal antigen 1 (mFA1)--the circulating gene product of the delta-like protein (dlk), preadipocyte factor 1 (Pref-1) and stromal-cell-derived protein 1 (SCP-1) cDNAs | Krogh TN | 1997 Mar 01 |
|
| 9266697 | Cloning and expression of cDNA for a human Gal(beta1-3)GalNAc alpha2,3-sialyltransferase from the CEM T-cell line | Giordanengo V | 1997 Jul 15 |
|
