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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G65562ZE
Summary
- GlyTouCan ID
-
G65562ZE
- IUPAC Condensed
- Neu5Ac(a2-3)Gal(b1-3)GalNAc(a1-
- Motifs
- Sialyl T antigen
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 674.24
External Links
- GlyConnect structure
- GlyGen
- ChEBI
- PubChem Compound
- PubChem Substance
- CarbBank
3D Structures
G72008IY
G02684WR
Organisms
| Organisms | Evidence |
|---|---|
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| ST6GALNAC1 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST6GALNAC3 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST3GAL2 | CMP-Neu5Ac |
G00031MO
|
R |
G65562ZE
|
R | |
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST3GAL4 | CMP-Neu5Ac |
G00031MO
|
free |
G65562ZE
|
free |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
benzyl |
G01614ZM
|
benzyl | |
| ST3GAL1 | CMP-Neu5Ac |
G00031MO
|
free |
G65562ZE
|
free | |
| ST3GAL4 | CMP-Neu5Ac |
G00031MO
|
free |
G65562ZE
|
free | |
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
R |
G01614ZM
|
R | |
| ST6GALNAC2 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr |
KEGG BRITE Database
Core Protein
GlycomeAtlas
Tissues in which this glycan is expressed are highlighted in yellow.
- Danio rerio
Literature
- Tissue
-
- heart
- intestine
- liver
- Reference
- Yamakawa N et al. Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns. Nat Commun. 2018;9(1):4647. Published 2018 Nov 7. doi:10.1038/s41467-018-06950-3
- DOI
- 10.1038/s41467-018-06950-3
Localization sites organized by hierarchy by Uber-anatomy ontology (UBERON)
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 5s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+2)4d 4:4d(5+1)5n
- WURCS
- WURCS=2.0/3,3,2/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3/a3-b1_b3-c2
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 3462190 | Structures of O-linked oligosaccharides isolated from normal granulocytes, chronic myelogenous leukemia cells, and acute myelogenous leukemia cells | Fukuda M | 1986 Sep 25 |
|
| 2943741 | Structural variations of O-linked oligosaccharides present in leukosialin isolated from erythroid, myeloid, and T-lymphoid cell lines | Carlsson SR | 1986 Sep 25 |
|
| 3758066 | The structure of the O-glycosidic oligosaccharide chains of the major Zajdela hepatoma ascites-cell-membrane glycoprotein | Nato F | 1986 Sep 1 |
|
| 3769917 | Porcine submaxillary mucin contains alpha 2----3- and alpha 2----6-linked N-acetyl- and N-glycolylneuraminic acid | SAVAGE AV | 1986 Oct 01 |
|
| 3801456 | Characterization of O-glycosidically linked oligosaccharides of rat erythrocyte membrane sialoglycoproteins | Edge AS | 1986 Dec 2 |
|
| 3514617 | Membrane glycophorins in Sta blood group erythrocytes | Blumenfeld OO | 1986 Apr 25 |
|
| 3007481 | Structures of O-linked oligosaccharides present in the proteoglycans secreted by human mammary epithelial cells | Gowda DC | 1986 Apr 15 |
|
| 3967649 | Structure determination of oligosaccharides isolated from Cad erythrocyte membranes by permethylation analysis and 500-MHz 1H-NMR spectroscopy | HERKT F | 1985 Jan 02 |
|
| 3855417 | Oligosaccharide Structures of the Low-molecular-weight Salivary Mucin from a Normal Individual and one with Cystic Fibrosis | Reddy MS | 1985 Jan |
|
| 4091823 | Comparative study of glycophorin A derived O-glycans from human Cad, Sd(a+) and Sd(a-) erythrocytes | Blanchard D | 1985 Dec 15 |
|
