Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Guidelines
MIRAGE
G56749GV

Summary
GlyTouCan ID
G56749GV
IUPAC Condensed
Neu5Ac(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Neu5Ac(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc(b1-
Motifs
N-Glycan complex N-acetyllactosamine Type 2 LN
Subsumption Level
Fully-defined saccharide
Monoisotopic Mass
2368.84
GlyConnect structure
GlyGen
ChEBI
PubChem Compound
PubChem Substance
GlycoShape
Displaying 1 entry
Archetype α β
G54258NG
G46854VN
G56749GV
3D Structures
GlycoShape
G56749GV
GLYCAM
Neup5Aca2-6DGalpb1-4DGlcpNAcb1-2DManpa1-3[Neup5Aca2-6DGalpb1-4DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-OH
Organisms
Displaying entries 1 - 5 of 6 in total
Organisms Evidence
Mus musculus (house mouse)
Gallus gallus (chicken)
Homo sapiens (human)
Rattus
Rattus norvegicus (Norway rat)
Taxonomic Hierarchy
KEGG BRITE Database
KEGG ID
Enzyme
References
Reactions
Displaying 1 entry
KEGG Reaction Enzyme Acceptor Product
R05990
GALAXY
Glucose Units
ODS
14.3
Amide
7.6
Degrading Enzymes
Displaying all 4 entries
Enzyme Substrate Product
α-Fucosidase
G56749GV
G84467IZ
α-Sialidase
G56749GV
G78059CC
β-HexNAcase
G14127XU
G56749GV
β-HexNAcase
G84108IZ
G56749GV
Glycans containing this structure in GALAXY
G19444JC
G14127XU
G30925FN
G84108IZ
G33241WC
G63902MT
G45720CA
GALAXY: Glycoanalysis by the three axes of MS and chromatography.
Core Protein
Displaying entries 1 - 10 of 36 in total
UniProt ID Protein Name Reference Source
P00450 Ceruloplasmin
P00747 Plasminogen
P01854 Immunoglobulin heavy constant epsilon
P01857 Immunoglobulin heavy constant gamma 1
P01859 Immunoglobulin heavy constant gamma 2
P01860 Immunoglobulin heavy constant gamma 3
P01861 Immunoglobulin heavy constant gamma 4
P01871 Immunoglobulin heavy constant mu
P01876 Immunoglobulin heavy constant alpha 1
P01877 Immunoglobulin heavy constant alpha 2
Sequence Descriptors
GlycoCT
RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:b-dglc-HEX-1:5
8s:n-acetyl
9b:b-dgal-HEX-1:5
10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
11s:n-acetyl
12b:a-dman-HEX-1:5
13b:b-dglc-HEX-1:5
14s:n-acetyl
15b:b-dgal-HEX-1:5
16b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
17s:n-acetyl
18b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(3+1)6d
6:6o(2+1)7d
7:7d(2+1)8n
8:7o(4+1)9d
9:9o(6+2)10d
10:10d(5+1)11n
11:5o(6+1)12d
12:12o(2+1)13d
13:13d(2+1)14n
14:13o(4+1)15d
15:15o(6+2)16d
16:16d(5+1)17n
17:1o(6+1)18d
WURCS
WURCS=2.0/6,12,11/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-1-2-3-1-4-5-3-1-4-5-6/a4-b1_a6-l1_b4-c1_c3-d1_c6-h1_d2-e1_e4-f1_f6-g2_h2-i1_i4-j1_j6-k2
Literature
Displaying entries 1 - 10 of 48 in total
PubMed ID Title First Author Publication Date Source
33167210 High-throughput glycopeptide profiling of prostate-specific antigen from seminal plasma by MALDI-MS Wang W 2021 Jan 15
  • GlyGen
  • PubChem
33383989 Bisecting GlcNAc Protein N-Glycosylation Is Characteristic of Human Adipogenesis Wongtrakul-Kish K 2021 Feb 5
  • GlyGen
32841605 Virus-Receptor Interactions of Glycosylated SARS-CoV-2 Spike and Human ACE2 Receptor Zhao P 2020 Oct 07
  • GlyGen
  • PubChem
30674035 Exploring Cerebrospinal Fluid IgG N-Glycosylation as Potential Biomarker for Amyotrophic Lateral Sclerosis Costa J 2019 Jan 23
  • GlyGen
24090084 Site-Specific Glycan-Peptide Analysis for Determination of N-Glycoproteome Heterogeneity Parker BL 2013 Dec 6
  • GlyGen
  • PubChem
20578731 Identification of N-glycosylation changes in the CSF and serum in patients with schizophrenia Stanta Johannes L 2010-09-03
  • GlyGen
12151713 N-glycosylation potential of maize: The human lactoferrin used as a model Samyn-Petit B 2001 Jul
  • GlyGen
  • PubChem
10782293 N-Linked oligosaccharide structures in the diamine oxidase from porcine kidney Huang Y 2000 Jan 12
  • GlyGen
  • PubChem
10504403 Structural characterization of the oligosaccharide chains of native and crystallized boar seminal plasma spermadhesin PSP-I and PSP-II glycoforms Nimtz M 1999 Oct
  • GlyGen
  • PubChem
9751792 Expression of N-linked sialyl Le(x) determinants and O-glycans in the carbohydrate moiety of human amniotic fluid transferrin during pregnancy van Rooijen JJ 1998 Nov
  • GlyGen
  • PubChem
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.2.1

Last updated: April 7, 2025