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GlyTouCan
Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Ovis aries (sheep) | |
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Escherichia coli |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9BVT8 | Transmembrane and ubiquitin-like domain-containing protein 1 | ||
| Q9BWV1 | Brother of CDO | ||
| Q9BX73 | TM2 domain-containing protein 2 | ||
| Q9BXS4 | Transmembrane protein 59 | ||
| Q9BXX0 | EMILIN-2 | ||
| Q9BYC5 | Alpha-(1,6)-fucosyltransferase | ||
| Q9BYJ0 | Fibroblast growth factor-binding protein 2 | ||
| Q9BZA7 | Protocadherin-11 X-linked | ||
| Q9BZM4 | UL16-binding protein 3 | ||
| Q9BZR6 | Reticulon-4 receptor |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O86H2K2 | Escherichia coli |
| E.coli O86H2K62 | Escherichia coli |
| E.coli O90 | Escherichia coli |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Xenopus tropicalis |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Homo sapiens |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Gallus gallus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Mus musculus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Rattus norvegicus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Bos taurus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Canis familiaris |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 3949914 | Simultaneous determination of N-acetylglucosamine, N-acetylgalactosamine, N-acetylglucosaminitol and N-acetylgalactosaminitol by gas—liquid chromatography | Mawhinney TP | 1986 Jan 03 |
|
| 3515994 | Carbohydrate Composition of Serum Transferrin in Alcoholic Patients | Stibler H | 1986 Jan |
|
| 3003076 | Characterization of the oligosaccharide alditols from ovarian cyst mucin glycoproteins of blood group A using high pressure liquid chromatography (HPLC) and high field 1H NMR spectroscopy | Dua VK | 1986 Feb 5 |
|
| 3699107 | A study of lectin-binding to the water-insoluble proteins of the lens | Russell P | 1986 Feb |
|
| 3515176 | Biochemical properties of larval excretory-secretory glycoproteins of the parasitic nematode Toxocara canis | Meghji M | 1986 Feb |
|
| 3814128 | Precipitation of the D-galactose specific lectin from Erythrina indica by a triantennary complex type oligosaccharide | Lokesh Bhattacharyya C | 1986 Dec 30 |
|
| 2946684 | Biosynthesis of sulfated asparagine-linked oligosaccharides on bovine lutropin. | Green ED | 1986 Dec 15 |
|
| 3812922 | Glycoconjugates in Sweat Glands and Other Structures of Skin from Normal and Cystic Fibrosis Subjects | Hazen-Martin DJ | 1986 Dec |
|
| 3560520 | [Reversible reactivity of the dansyl derivative of N-acetylgalactosamine with Helix pomatia A hemagglutinin] | Yoshii T | 1986 Dec |
|
| 2435937 | Avidity effect on the interaction between Helix pomatia A hemagglutinin and N-acetylgalactosamine-conjugated dextran | Yoshii T | 1986 Dec |
|
PubAnnotation
