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GlyTouCan
Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Ovis aries (sheep) | |
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Escherichia coli |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O75460 | Serine/threonine-protein kinase/endoribonuclease IRE1 | ||
| O75462 | Cytokine receptor-like factor 1 | ||
| O75487 | Glypican-4 | ||
| O75509 | Tumor necrosis factor receptor superfamily member 21 | ||
| O75752 | UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 | ||
| O75882 | Attractin | ||
| O75976 | Carboxypeptidase D | ||
| O76061 | Stanniocalcin-2 | ||
| O94766 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 | ||
| O94856 | Neurofascin |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O86H2K2 | Escherichia coli |
| E.coli O86H2K62 | Escherichia coli |
| E.coli O90 | Escherichia coli |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Xenopus tropicalis |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Homo sapiens |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Gallus gallus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Mus musculus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Rattus norvegicus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Bos taurus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Canis familiaris |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 8956292 | Defining oligosaccharide specificity for initial sperm-zona pellucida adhesion in the mouse | Thaler CD | 1996 Dec |
|
| 8702831 | Kidney N-Acetylgalactosamine (GalNAc)-1-phosphate Kinase, a New Pathway of GalNAc Activation | Pastuszak I | 1996 Aug 23 |
|
| 8774711 | Mutational Studies of the Amino Acid Residues in the Combining Site of Erythrina corallodendron Lectin | Adar R | 1996 Aug 01 |
|
| 8707864 | Cleavage of the transferrin receptor is influenced by the composition of the O‐linked carbohydrate at position 104 | Rutledge EA | 1996 Aug |
|
| 8737253 | Structural characterization of a novel mono-sulfated gangliotriaosylceramide containing a 3-O-sulfated N-acetylgalactosamine from rat kidney | Tadano-Aritomi K | 1996 Apr |
|
| 8721968 | The acquired-B phenomenon | Judd WJ | 1996 Apr |
|
| 9020542 | Nucleotide-sugar binding to ribosomes. Comparison of affinity and capacity of gastric mucosa and liver ribosomes to sugar-nucleotides | Paszkiewicz-Gadek A | 1996 |
|
| 8793500 | Tn and sialyl-Tn antigens as potential prognostic markers in human ovarian carcinoma | Ogawa H | 1996 |
|
| 7751324 | Distribution of Tn antigen recognized by an anti-Tn monoclonal antibody (MLS128) in normal and malignant tissues of the digestive tract | Ohshio G | 1995 |
|
| 7673197 | N-acetylgalactosamine (GalNAc) transfer to the common carbohydrate-protein linkage region of sulfated glycosaminoglycans. Identification of UDP-GalNAc:chondro-oligosaccharide alpha-N-acetylgalactosaminyltransferase in fetal bovine serum | Kitagawa H | 1995 Sep 22 |
|
PubAnnotation
