Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
GlycanBuilder
Glycan Converters
GlycoMaple
GlycomeAtlas
LM-GlycomeAtlas
GALAXY
MCAW
GlycoSim
GRable
Guidelines
MIRAGE
G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Ovis aries (sheep) | |
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Escherichia coli |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9C002 | Normal mucosa of esophagus-specific gene 1 protein | ||
| Q9C0B5 | Palmitoyltransferase ZDHHC5 | ||
| Q9C0D2 | Centrosomal protein of 295 kDa | ||
| Q9GZM5 | Protein YIPF3 | ||
| Q9GZP4 | PITH domain-containing protein 1 | ||
| Q9GZZ8 | Extracellular glycoprotein lacritin | ||
| Q9H013 | Disintegrin and metalloproteinase domain-containing protein 19 | ||
| Q9H173 | Nucleotide exchange factor SIL1 | ||
| Q9H1B5 | Xylosyltransferase 2 | ||
| Q9H1U4 | Multiple epidermal growth factor-like domains protein 9 |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Sus scrofa |
| Initial triggering of complement | Mus musculus |
| Initial triggering of complement | Gallus gallus |
| Initial triggering of complement | Xenopus tropicalis |
| Initial triggering of complement | Sus scrofa |
| Initial triggering of complement | Bos taurus |
| Initial triggering of complement | Canis familiaris |
| Initial triggering of complement | Rattus norvegicus |
| Initial triggering of complement | Homo sapiens |
| Lectin pathway of complement activation | Bos taurus |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 3755041 | Thermodynamic and kinetic studies on saccharide binding to soya-bean agglutinin | Swamy MJ | 1986 Mar 15 |
|
| 2871621 | Pathogenesis of Disease Caused by Entamoeba histolytica: Studies of Adherence, Secreted Toxins, and Contact-Dependent Cytolysis | Ravdin JI | 1986 Mar 01 |
|
| 3510886 | Immunofluorescent localization of a monoclonally defined carbohydrate cell surface antigen (IIC3) during mouse development | Babiarz BS | 1986 Mar |
|
| 3085365 | Interaction of Trypanosoma cruzi with macrophages: effect of previous incubation of the parasites or the host cells with lectins | de Araújo-Jorge TC | 1986 Mar |
|
| 3089600 | Biosynthesis in vitro of a globoside containing a 2-acetamido-2-deoxy-beta-D-galactopyranosyl group (1----3)-linked and Forssman glycolipid by two N-acetylgalactosaminyltransferases from chemically transformed guinea pig cells | Das KK | 1986 Jun 01 |
|
| 2427661 | GABAergic neurons of rodent brain correspond partially with those staining for glycoconjugate with terminal N-acetylgalactosamine | Nakagawa F | 1986 Jun |
|
| 3019392 | Binding of N-acetylgalactosamine-specific lectins to spin-labeled galactosamine derivatives | Berliner LJ | 1986 Jul 01 |
|
| 3519750 | Ultrastructural localization of glycoconjugates in the fungus Ascocalyx abietina, the Scleroderris canker agent of conifers, using lectin-gold complexes. | Benhamou N | 1986 Jul |
|
| 3944078 | Asparaginyl-N-acetylgalactosamine. Linkage unit of halobacterial glycosaminoglycan. | Paul G | 1986 Jan 25 |
|
| 3944281 | Selective cytochemical demonstration of glycoconjugate‐containing terminal N‐acetylgalactosamine on some brain neurons | Nakagawa F | 1986 Jan 08 |
|
PubAnnotation
