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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
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G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Ovis aries (sheep) | |
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Escherichia coli |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P12259 | Coagulation factor V | ||
| P12272 | Parathyroid hormone-related protein | ||
| P12643 | Bone morphogenetic protein 2 | ||
| P12645 | Bone morphogenetic protein 3 | ||
| P12830 | Cadherin-1 | ||
| P13224 | Platelet glycoprotein Ib beta chain | ||
| P13473 | Lysosome-associated membrane glycoprotein 2 | ||
| P13591 | Neural cell adhesion molecule 1 | ||
| P13611 | Versican core protein | ||
| P13645 | Keratin, type I cytoskeletal 10 |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O101 | Escherichia coli |
| E.coli O103 | Escherichia coli |
| E.coli O107 | Escherichia coli |
| E.coli O112ab | Escherichia coli |
| E.coli O112ac | Escherichia coli |
| E.coli O116 | Escherichia coli |
| E.coli O117 | Escherichia coli |
| E.coli O125ab | Escherichia coli |
| E.coli O127 | Escherichia coli |
| E.coli O128ab-H27 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 2414277 | Differing reactions of monoclonal anti-A antibodies with oligosaccharides related to blood group A. | Gooi HC | 1985 Oct 25 |
|
| 3897376 | Role of N-acetyl-D-galactosamine residue on B151K12-derived T cell-replacing factor (B151-TRF) molecule in B cell-receptor binding and -stimulating activity. | Takahama Y | 1985 Oct 01 |
|
| 2413456 | Blood group A cross-reacting epitope defined by monoclonal antibodies NCC-LU-35 and -81 expressed in cancer of blood group O or B individuals: its identification as Tn antigen | Hirohashi S | 1985 Oct |
|
| 3936617 | Two dimensional J-resolved and SECSY 1H-n.m.r. spectroscopy of the characteristic sequence of O-type carbohydrate-peptide linkage | Davoust D | 1985 Nov 01 |
|
| 2859338 | N-Acetyl-D-Galactosamine-Inhibitable Adherence Lectin of Entamoeba histolytica. I. Partial Purification and Relation to Amoebic Virulence in Vitro | Ravdin JI | 1985 May 01 |
|
| 2859339 | N-Acetyl-D-Galactosamine-Inhibitable Adherence Lectin of Entamoeba histolytica. II. Mitogenic Activity for Human Lymphocytes | Salata RA | 1985 May 01 |
|
| 2580787 | Adherence of Entamoeba histolytica trophozoites to rat and human colonic mucosa | Ravdin JI | 1985 May |
|
| 2579071 | The effect of a water-soluble tris-galactoside-terminated cholesterol derivative on the fate of low density lipoproteins and liposomes. | van Berkel TJ | 1985 Mar 10 |
|
| 4038883 | Physiological and pathobiological significance of ocular glycoproteins. I. Studies using fluorescein labelled glycine max. | Ahmed AI | 1985 Mar 01 |
|
| 3935630 | The carbohydrates associated with the surfaces of hamster alveolar macrophages: a study using fluorescein-conjugated lectins | Meban C | 1985 Mar |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Immunological response from an entirely carbohydrate antigen: design of synthetic vaccines based on Tn-PS A1 conjugates. |
|
J Am Chem Soc | 2009 Jul 22 | 19552408 |
| Two different glycosyltransferase defects that result in GalNAc alpha-O-peptide (Tn) expression. |
|
Glycobiology | 1994 Jun | 7949653 |
| Localization of O-glycan initiation, sphingomyelin synthesis, and glucosylceramide synthesis in Vero cells with respect to the endoplasmic reticulum-Golgi intermediate compartment. |
|
J Biol Chem | 1994 Feb 11 | 8307959 |
| Carbohydrate receptor-mediated gene transfer to human T leukaemic cells. |
|
Glycobiology | 1994 Aug | 7827404 |
