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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
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G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Human immunodeficiency virus 1 |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9BVT8 | Transmembrane and ubiquitin-like domain-containing protein 1 | ||
| Q9BWV1 | Brother of CDO | ||
| Q9BX73 | TM2 domain-containing protein 2 | ||
| Q9BXS4 | Transmembrane protein 59 | ||
| Q9BXX0 | EMILIN-2 | ||
| Q9BYC5 | Alpha-(1,6)-fucosyltransferase | ||
| Q9BYJ0 | Fibroblast growth factor-binding protein 2 | ||
| Q9BZA7 | Protocadherin-11 X-linked | ||
| Q9BZM4 | UL16-binding protein 3 | ||
| Q9BZR6 | Reticulon-4 receptor |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O101 | Escherichia coli |
| E.coli O103 | Escherichia coli |
| E.coli O107 | Escherichia coli |
| E.coli O112ab | Escherichia coli |
| E.coli O112ac | Escherichia coli |
| E.coli O116 | Escherichia coli |
| E.coli O117 | Escherichia coli |
| E.coli O125ab | Escherichia coli |
| E.coli O127 | Escherichia coli |
| E.coli O128ab-H27 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 1207868 | Distribution and age-dependent concentration in brain tissue of glycoproteins containing N-acetylgalactosamine | Brunngraber EG | 1975 Dec |
|
| 1060425 | Heterogeneity of carcinoembryonic antigen. II. Monosaccharide composition of concanavalin A-reactive and -nonreactive CEA | Yamamoto T | 1975 Aug 22 |
|
| 54033 | PHYSICAL CHEMISTRY AND IMMUNOCHEMISTRY OF CEA: ROLE OF THE PROTEIN PORTION OF THE MOLECULE IN DETERMINING TUMOR ANTIGENICITY* | Banjo C | 1975 Aug 22 |
|
| 1180568 | Circular dichroism and saccharide-induced conformational transitions of lectins from Ricinus communis | Shimazaki K | 1975 Aug |
|
| 1159044 | Thyroglobulin Biosynthesis in “Cold” and “Hot” Nodules in The Human Thyroid Gland | MONACO F | 1975 Aug |
|
| 1158845 | Association of lack of cell wall teichuronic acid with formation of cell packets of Micrococcus lysodeikticus (luteus) mutants | Yamada M | 1975 Aug |
|
| 808222 | The teichuronic acid of cell walls of Bacillus subtilis W23 grown in a chemostat under phosphate limitation | Wright J | 1975 Apr 01 |
|
| 1169155 | Functional involvement of specific carbohydrate in teratoma cell adhesion factor | Oppenheimer SB | 1975 Apr |
|
| 48256 | Nature of the tumor-associated determinant(s) of carcinoembryonic antigen. | Hammarström S | 1975 Apr |
|
| 1189846 | Intestinal glycoproteins of germfree rats. IV. Oligosaccharides obtained by chemical degradation of a water-soluble glycoprotein fraction | Wold JK | 1975 |
|
PubAnnotation
