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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Ovis aries (sheep) | |
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Escherichia coli |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O75460 | Serine/threonine-protein kinase/endoribonuclease IRE1 | ||
| O75462 | Cytokine receptor-like factor 1 | ||
| O75487 | Glypican-4 | ||
| O75509 | Tumor necrosis factor receptor superfamily member 21 | ||
| O75752 | UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 | ||
| O75882 | Attractin | ||
| O75976 | Carboxypeptidase D | ||
| O76061 | Stanniocalcin-2 | ||
| O94766 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 | ||
| O94856 | Neurofascin |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O101 | Escherichia coli |
| E.coli O103 | Escherichia coli |
| E.coli O107 | Escherichia coli |
| E.coli O112ab | Escherichia coli |
| E.coli O112ac | Escherichia coli |
| E.coli O116 | Escherichia coli |
| E.coli O117 | Escherichia coli |
| E.coli O125ab | Escherichia coli |
| E.coli O127 | Escherichia coli |
| E.coli O128ab-H27 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 92996 | Interaction of wheat germ agglutinin with sialic acid | Peters BP | 1979 Nov 01 |
|
| 518853 | Gangliosides of human erythrocytes. A novel ganglioside with a unique N-acetylneuraminosyl-(2 .fwdarw. 3)-N-acetylgalactosamine structure | Watanabe K | 1979 Nov 01 |
|
| 400638 | Immunochemical studies on lectins and their application to the fractionation of blood group substances and cells | Pereira ME | 1979 Nov |
|
| 315831 | Activation of leopard frog (Rana pipiens) spleen lymphocytes by concanavalin A and phytohemagglutinin | Wright RK | 1979 Nov |
|
| 160243 | Pretibial myxoedema: stilmulation of mucopolysaccharide production of fibroblasts by serum | KOLLIFFE DS | 1979 Nov |
|
| 223774 | [Molecular forms of human leukocytic alpha-galactosidase and N-acetyl-alpha-galactosaminidase] | Salvayre R | 1979 Mar 26 |
|
| 33982 | Glycoproteins and blood group activity. Oligosaccharides of A+ hog submaxillary glycoproteins | Aminoff D | 1979 Mar 25 |
|
| 444561 | Characterization of the sulfated glycosaminoglycan on the surface and in the storage granules of rabbit platelets | WARD J | 1979 Mar 07 |
|
| 453854 | Chondroitin sulfate-degrading enzymes in human polymorphonuclear leukocytes: Characteristics and evidence for concerted mechanism | Buermann CW | 1979 Mar |
|
| 486126 | The effect of tunicamycin on the glycosylation of lactating-rabbit mammary glycoproteins | Speake BK | 1979 Jun 15 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Immunological response from an entirely carbohydrate antigen: design of synthetic vaccines based on Tn-PS A1 conjugates. |
|
J Am Chem Soc | 2009 Jul 22 | 19552408 |
| Two different glycosyltransferase defects that result in GalNAc alpha-O-peptide (Tn) expression. |
|
Glycobiology | 1994 Jun | 7949653 |
| Localization of O-glycan initiation, sphingomyelin synthesis, and glucosylceramide synthesis in Vero cells with respect to the endoplasmic reticulum-Golgi intermediate compartment. |
|
J Biol Chem | 1994 Feb 11 | 8307959 |
| Carbohydrate receptor-mediated gene transfer to human T leukaemic cells. |
|
Glycobiology | 1994 Aug | 7827404 |
