GlyCosmos Portal

Submissions

G00031MO

Summary

GlyTouCan ID: G00031MO
IUPAC Condensed: Gal(b1-3)GalNAc(a1-
Motifs: O-Glycan core 1 T antigen TF antigen
Subsumption Level: Fully-defined saccharide
Monoisotopic Mass: 383.14

External Links

GlyConnect structure

1947

GlyGen

G00031MO

ChEBI

61820

PubChem Compound

5288347

PubChem Substance

252294787

CarbBank

3D Structures

GLYCAM: DGalpb1-3DGalpNAca1-OH

GlycoShape

G00031MO

Displaying 1 entry
Archetype	α	β
G00032MO	G00031MO	G01534TU

Organisms

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Organisms	Evidence
Gadus	GlyTouCan(glycome-db)
Cricetulus griseus (Chinese hamster)	GlyTouCan(glycome-db)
Mus musculus (house mouse)	GlyConnectStructure GlyTouCan(glycome-db) GlycoEpitope
Bos taurus (domestic cattle)	GlyTouCan(glycome-db)
Rattus	GlyTouCan(glycome-db)

Taxonomic Hierarchy

root

Viruses [inference]

Riboviria [inference]

Orthornavirae [inference]

Pisuviricota [inference]

Pisoniviricetes [inference]

Nidovirales [inference]

Cornidovirineae [inference]

Coronaviridae [inference]

Orthocoronavirinae [inference]

Betacoronavirus [inference]

Sarbecovirus [inference]

Severe acute respiratory syndrome-related coronavirus [inference]

Severe acute respiratory syndrome coronavirus 2

cellular organisms [inference]

Eukaryota (eucaryotes) [inference]

Opisthokonta [inference]

Metazoa (metazoans) [inference]

Eumetazoa [inference]

Bilateria [inference]

Deuterostomia [inference]

Chordata (chordates) [inference]

Craniata [inference]

Vertebrata (vertebrates) [inference]

Gnathostomata (jawed vertebrates) [inference]

Teleostomi [inference]

Euteleostomi (bony vertebrates) [inference]

Actinopterygii (ray-finned fishes) [inference]

Actinopteri [inference]

Neopterygii [inference]

Teleostei (teleost fishes) [inference]

Osteoglossocephalai [inference]

Clupeocephala [inference]

Euteleosteomorpha [inference]

Neoteleostei [inference]

Eurypterygia [inference]

Ctenosquamata [inference]

Acanthomorphata [inference]

Paracanthopterygii [inference]

Zeiogadaria [inference]

Gadariae [inference]

Gadiformes (cods and others) [inference]

Gadoidei [inference]

Gadidae (cods) [inference]

Gadus

Gadus chalcogrammus (walleye pollock)

Pollachius [inference]

Pollachius pollachius (pollack)

Sarcopterygii [inference]

Dipnotetrapodomorpha [inference]

Tetrapoda (tetrapods) [inference]

Amniota (amniotes) [inference]

Mammalia (mammals) [inference]

Theria [inference]

Eutheria (placentals) [inference]

Boreoeutheria [inference]

Euarchontoglires [inference]

Primates [inference]

Haplorrhini [inference]

Simiiformes [inference]

Catarrhini [inference]

Cercopithecoidea [inference]

Cercopithecidae (Old World monkeys) [inference]

Cercopithecinae [inference]

Macaca (macaques) [inference]

Macaca mulatta (Rhesus monkey)

Hominoidea (apes) [inference]

Hominidae (great apes) [inference]

Homininae [inference]

Homo [inference]

Homo sapiens (human)

Glires (Rodents and rabbits) [inference]

Rodentia (rodent) [inference]

Myomorpha (mice and others) [inference]

Muroidea [inference]

Muridae [inference]

Murinae [inference]

Mus (mice) [inference]

Mus [inference]

Mus musculus (house mouse)

Rattus

Rattus norvegicus (Norway rat)

Cricetidae [inference]

Cricetinae (hamsters) [inference]

Cricetulus [inference]

Cricetulus griseus (Chinese hamster)

Lagomorpha [inference]

Leporidae (rabbits and hares) [inference]

Oryctolagus [inference]

Oryctolagus cuniculus (rabbit)

Laurasiatheria [inference]

Artiodactyla (even-toed ungulates & whales) [inference]

Suina [inference]

Suidae (pigs) [inference]

Sus [inference]

Sus scrofa (pig) [inference]

Sus scrofa domesticus (domestic pig)

Ruminantia [inference]

Pecora [inference]

Bovidae [inference]

Bovinae [inference]

Bos (cattle) [inference]

Bos taurus (domestic cattle)

Carnivora (carnivores) [inference]

Caniformia [inference]

Canidae (dog, coyote, wolf, fox) [inference]

Canis [inference]

Canis lupus (gray wolf) [inference]

Canis lupus familiaris (dog)

Protostomia [inference]

Ecdysozoa [inference]

Panarthropoda [inference]

Arthropoda (arthropods) [inference]

Mandibulata [inference]

Pancrustacea [inference]

Hexapoda (hexapods) [inference]

Insecta (insects) [inference]

Dicondylia [inference]

Pterygota (winged insects) [inference]

Neoptera [inference]

Endopterygota [inference]

Diptera (flies) [inference]

Brachycera [inference]

Muscomorpha [inference]

Eremoneura [inference]

Cyclorrhapha [inference]

Schizophora [inference]

Acalyptratae [inference]

Ephydroidea [inference]

Drosophilidae (pomace flies) [inference]

Drosophilinae [inference]

Drosophilini [inference]

Drosophila (fruit flies) [inference]

Sophophora [inference]

melanogaster group [inference]

melanogaster subgroup [inference]

Drosophila melanogaster (fruit fly)

Bacteria (eubacteria) [inference]

Pseudomonadota [inference]

Gammaproteobacteria [inference]

Enterobacterales [inference]

Enterobacteriaceae [inference]

Shigella [inference]

Shigella dysenteriae

FCB group [inference]

Bacteroidota/Chlorobiota group [inference]

Bacteroidota [inference]

Bacteroidia [inference]

Bacteroidales [inference]

Bacteroidaceae [inference]

Bacteroides [inference]

Bacteroides ovatus

GlycoGene Database (GGDB)

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
C1GALT1	(not applicable)	G57321FI	Ser/Thr	G00031MO	Ser/Thr	11677243
ST6GALNAC1	CMP-Neu5Ac	G00031MO	Ser/Thr	G56682BC	Ser/Thr	10536037
ST3GAL2	CMP-Neu5Ac	G00031MO	R	G65562ZE	R	9266697
ST6GALNAC2	CMP-Neu5Ac	G00031MO	Ser/Thr	G56682BC	Ser/Thr	10742600
ST3GAL4	CMP-Neu5Ac	G00031MO	free	G65562ZE	free	8288606

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
ST6GALNAC2	CMP-Neu5Ac	G00031MO	Ser/Thr	G56682BC	Ser/Thr	10536037 10742600
ST3GAL1	CMP-Neu5Ac	G00031MO	free	G65562ZE	free	8027041 8288606
ST3GAL4	CMP-Neu5Ac	G00031MO	free	G65562ZE	free	8288606
ST3GAL4	CMP-Neu5Ac	G00031MO	Antifreeze glycoprotein	G65562ZE	Antifreeze glycoprotein	8288606
ST3GAL2	CMP-Neu5Ac	G00031MO		G65562ZE		8920913

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Reference
ST6GALNAC2	CMP-Neu5Ac	G00031MO	benzyl	10742600 11062056
ST6GAL1	CMP-Neu5Ac	G00031MO	benzyl	12603328
ST6GAL2	CMP-Neu5Ac	G00031MO	benzyl	12603328
GAL3ST2	PAPS	G00031MO	pNP	11323440
GAL3ST3	PAPS	G00031MO	pNP	11323440

KEGG BRITE Database

KEGG ID

Enzyme

References

Reactions

Displaying **all 4** entries
KEGG Reaction	Enzyme	Acceptor	Product
R05908	2.4.1.122	G57321FI	G00031MO
R12704	2.4.3.3	G00031MO	G28694FA
R05912	2.4.1.102	G00031MO	G00033MO
R05913	2.4.3.4	G00031MO	G65562ZE

Core Protein

Displaying entries **1 - 10** of 50 in total

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UniProt ID	Protein Name	Reference	Source
D9N008	Epiglycanin	1125949 115878 571355	GlyConnect
O02197	Circulating cathodic antigen	7925469	GlyConnect
P00743	Coagulation factor X	6767721	GlyConnect
P01190	Pro-opiomelanocortin	7507111	GlyConnect
P01215	Glycoprotein hormones alpha chain	1967025 3335536	GlyGen
P01375	Tumor necrosis factor	8631363	GlyGen GlyConnect
P01588	Erythropoietin	22678432 32578997 8477709	GlyGen GlyConnect
P01824	Immunoglobulin heavy variable 4-39	6619128	GlyGen GlyConnect
P01860	Immunoglobulin heavy constant gamma 3	25759508	GlyGen GlyConnect GlyConnect GlyConnect
P01876	Immunoglobulin heavy constant alpha 1	1280920 20030399 2628063 4373463 7215351 9442070	GlyGen GlyConnect

GlycoEpitope

Epitope ID: EP0020

Pathway

Displaying **all 8** entries
Pathway Name	Organism
E.coli O107	Escherichia coli
E.coli O117	Escherichia coli
E.coli O185	Escherichia coli
E.coli O5ab	Escherichia coli
E.coli O5ac	Escherichia coli
E.coli O70	Escherichia coli
E.coli O71	Escherichia coli
E.coli O83	Escherichia coli

Sequence Descriptors

GlycoCT

RES
1b:a-dgal-HEX-1:5
2s:n-acetyl
3b:b-dgal-HEX-1:5
LIN
1:1d(2+1)2n
2:1o(3+1)3d

WURCS

WURCS=2.0/2,2,1/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5]/1-2/a3-b1

Literature

Displaying entries **101 - 110** of **216** in total

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PubMed ID	Title	First Author	Publication Date	Source
10683255	Isolation and characterization of glycophorin from nucleated (chicken) erythrocytes	Duk M	2000-03-01	GlyGen
11326683	Expression of the Thomsen-Friedenreich (TF) antigen in the human placenta	Richter DU	2000 Nov-Dec	GlyGen GlycoEpitope
11062056	Cloning, expression and gene organization of a human Neu5Ac alpha 2-3Gal beta 1-3GalNAc alpha 2,6-sialyltransferase: hST6GalNAcIV	Harduin-Lepers A	2000 Nov 15	PubChem
10861392	Metabolic shifts do not influence the glycosylation patterns of a recombinant fusion protein expressed in BHK cells	Cruz HJ	2000 Jul 20	GlyGen PubChem
11123894	O-Glycan Analysis of Natural Human Neutrophil Gelatinase B Using a Combination of Normal Phase- HPLC and Online Tandem Mass Spectrometry: Implications for the Domain Organization of the Enzyme	Mattu TS	2000 Dec 01	GlyGen PubChem
10753916	Control of O-glycan branch formation. Molecular cloning and characterization of a novel thymus-associated core 2 beta1, 6-n-acetylglucosaminyltransferase	Schwientek T	2000 Apr 14	PubChem
10742600	Molecular cloning and functional expression of human ST6GalNAc II. Molecular expression in various human cultured cells	Samyn-Petit B	2000 Apr 06	PubChem
10536037	Cloning and expression of a human gene encoding an N-acetylgalactosamine-alpha2,6-sialyltransferase (ST6GalNAc I): a candidate for synthesis of cancer-associated sialyl-Tn antigens	Ikehara Y	1999 Nov 01	PubChem
9915862	Molecular cloning and expression of a novel beta-1, 6-N-acetylglucosaminyltransferase that forms core 2, core 4, and I branches	Yeh JC	1999 Jan 29	PubChem
9988682	Control of O-glycan branch formation. Molecular cloning of human cDNA encoding a novel beta1,6-N-acetylglucosaminyltransferase forming core 2 and core 4	Schwientek T	1999 Feb 19	PubChem

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Guidelines

Summary

External Links

KEGG BRITE Database

GlycoEpitope

Sequence Descriptors

International Collaboration

Acknowledgements