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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
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GALAXY
MCAW
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Guidelines
MIRAGE
G29857RC
Summary
- GlyTouCan ID
-
G29857RC
- IUPAC Condensed
- Gal(b1-4)GlcNAc(b1-2)[Gal(b1-4)GlcNAc(b1-4)]Man(a1-3)[Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc(b1-
- Motifs
- N-Glycan complex N-acetyllactosamine Type 2 LN
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 2005.72
3D Structures
Organisms
| Organisms | Evidence |
|---|---|
| Semliki Forest virus | |
| Bos taurus (domestic cattle) |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
G10599NM
GALAXY
Glucose Units
- ODS
- 12.7
- Amide
- 8.3
- Degrading Enzymes
G91754NA
G67465JK
G30651IU
G36523TZ
G25097RR
Glycans containing this structure in GALAXY
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P00742 | Coagulation factor X | ||
| P00747 | Plasminogen | ||
| P00797 | Renin | ||
| P01215 | Glycoprotein hormones alpha chain | ||
| P01579 | Interferon gamma | ||
| P01588 | Erythropoietin | ||
| P01854 | Immunoglobulin heavy constant epsilon | ||
| P01876 | Immunoglobulin heavy constant alpha 1 | ||
| P01880 | Immunoglobulin heavy constant delta | ||
| P02771 | Alpha-fetoprotein |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:b-dgal-HEX-1:5 13b:a-dman-HEX-1:5 14b:b-dglc-HEX-1:5 15s:n-acetyl 16b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:6o(4+1)10d 10:10d(2+1)11n 11:10o(4+1)12d 12:5o(6+1)13d 13:13o(2+1)14d 14:14d(2+1)15n 15:14o(4+1)16d
- WURCS
- WURCS=2.0/4,11,10/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5]/1-1-2-3-1-4-1-4-3-1-4/a4-b1_b4-c1_c3-d1_c6-i1_d2-e1_d4-g1_e4-f1_g4-h1_i2-j1_j4-k1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 15620693 | A novel β1,3‐N‐acetylglucosaminyltransferase (β3Gn‐T8), which synthesizes poly‐N‐acetyllactosamine, is dramatically upregulated in colon cancer | Ishida H | 2004 Nov 28 |
|
| 15316280 | Abnormal biantennary sugar chains are expressed in human chorionic gonadotropin produced in the choriocarcinoma cell line, JEG-3 | Takamatsu S | 2004 |
|
| 11805077 | Structural analysis of sulfated N-linked oligosaccharides in erythropoietin | Kawasaki N | 2001 Dec |
|
| 10764840 | Unusual N-glycosylation of a recombinant human erythropoietin expressed in a human lymphoblastoid cell line does not alter its biological properties | Cointe D | 2000 May |
|
| 10704524 | Human alpha-N-acetylgalactosaminidase: site occupancy and structure of N-linked oligosaccharides | Ohta M | 2000 Mar |
|
| 11180632 | Structure of the asparagine-linked sugar chains of porcine kidney and human urine cerebroside sulfate activator protein | Faull KF | 2000 Dec |
|
| 10918037 | Carbohydrate structures of soluble human L-selectin recombinantly expressed in baby-hamster kidney cells | Gohlke M | 2000 Aug |
|
| 10764830 | Remodeling of sugar chain structures of human interferon-gamma | Fukuta K | 2000 Apr |
|
| 10406848 | Glycosylation of a CNS-specific extracellular matrix glycoprotein, tenascin-R, is dominated by O-linked sialylated glycans and 'brain-type' neutral N-glycans | Zamze S | 1999 Aug |
|
| 10211705 | Evidence for a site-specific fucosylation of N-linked oligosaccharide of immunoglobulin A1 from normal human serum | Tanaka A | 1998 Oct |
|
