Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
GlycanBuilder
Glycan Converters
GlycoMaple
GlycomeAtlas
LM-GlycomeAtlas
GALAXY
MCAW
GlycoSim
GRable
Guidelines
MIRAGE
G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Ovis aries (sheep) | |
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Escherichia coli |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P08174 | Complement decay-accelerating factor | ||
| P08476 | Inhibin beta A chain | ||
| P08572 | Collagen alpha-2(IV) chain | ||
| P08575 | Receptor-type tyrosine-protein phosphatase C | ||
| P08581 | Hepatocyte growth factor receptor | ||
| P08648 | Integrin alpha-5 | ||
| P08887 | Interleukin-6 receptor subunit alpha | ||
| P08949 | Neuromedin-B | ||
| P09603 | Macrophage colony-stimulating factor 1 | ||
| P09758 | Tumor-associated calcium signal transducer 2 |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Sus scrofa |
| Initial triggering of complement | Mus musculus |
| Initial triggering of complement | Gallus gallus |
| Initial triggering of complement | Xenopus tropicalis |
| Initial triggering of complement | Sus scrofa |
| Initial triggering of complement | Bos taurus |
| Initial triggering of complement | Canis familiaris |
| Initial triggering of complement | Rattus norvegicus |
| Initial triggering of complement | Homo sapiens |
| Lectin pathway of complement activation | Bos taurus |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 3094936 | The effect of penultimate N-acetylgalactosamine 4-sulfate on Chondroitin chain elongation | Cogburn JN | 1986 Aug 15 |
|
| 3768888 | Isolation and characterization of a receptor lectin specific for galactose/N-acetylgalactosamine from macrophages | Kawasaki T | 1986 Aug 15 |
|
| 3007660 | Characterization of a Herpes Simplex Virus Type 2-specified Glycoprotein with Affinity for N-Acetylgalactosamine-specific Lectins and Its Identification as g92K or gG | Olofsson S | 1986 Apr 01 |
|
| 3729878 | Lectin Binding and the Carbohydrate Moieties Present on Newcastle Disease Virus Strains | McMillan BC | 1986 Apr |
|
| 3702705 | Use of avidin-iminobiotin complexes for purifying plasma membrane proteins | Zeheb R | 1986 |
|
| 3274053 | Specificity of hemagglutinin of Falcata japonica which reacts with blood group active N-acetyl-D-galactosamine residues | Nakajima T | 1986 |
|
| 3757884 | [Localization of lectin receptors on the surface of C1300 neuroblastoma cells] | Khomutovskiĭ OA | 1986 |
|
| 2884962 | [Inhibition by antibodies of the adhesion of trophozoites of Entamoeba histolytica] | Barranco-Tovar C | 1986 |
|
| 2996612 | Galactose-specific receptors on liver cells. I. Hepatocyte and liver macrophage receptors differ in their membrane anchorage | Kempka G | 1985 Oct 30 |
|
| 4055733 | Sulfation of p-nitrophenyl-N-acetyl-beta-D-galactosaminide with a microsomal fraction from cultured chondrocytes. | Habuchi O | 1985 Oct 25 |
|
PubAnnotation
