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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
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G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Ovis aries (sheep) | |
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Escherichia coli |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O14672 | Disintegrin and metalloproteinase domain-containing protein 10 | ||
| O14763 | Tumor necrosis factor receptor superfamily member 10B | ||
| O14773 | Tripeptidyl-peptidase 1 | ||
| O14786 | Neuropilin-1 | ||
| O14791 | Apolipoprotein L1 | ||
| O14967 | Calmegin | ||
| O15031 | Plexin-B2 | ||
| O15072 | A disintegrin and metalloproteinase with thrombospondin motifs 3 | ||
| O15230 | Laminin subunit alpha-5 | ||
| O15232 | Matrilin-3 |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| Lectin pathway of complement activation | Sus scrofa |
| Lectin pathway of complement activation | Canis familiaris |
| Lectin pathway of complement activation | Xenopus tropicalis |
| Lectin pathway of complement activation | Rattus norvegicus |
| Lectin pathway of complement activation | Homo sapiens |
| Lectin pathway of complement activation | Mus musculus |
| Lectin pathway of complement activation | Gallus gallus |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 31638776 | Synthesis and Characterization of Versatile O-Glycan Precursors for Cellular O-Glycomics | Zhang Q | 2019 Oct 22 |
|
| 31617782 | Effect of modular conjugation strategy forN-acetylgalactosamine-targeted antisense oligonucleotides | Yamamoto T | 2019 Oct 16 |
|
| 31609614 | Ring Puckering Landscapes of Glycosaminoglycan-Related Monosaccharides from Molecular Dynamics Simulations | Alibay I | 2019 Oct 14 |
|
| 31393218 | Ligand Conjugated Multimeric siRNAs Enable Enhanced Uptake and Multiplexed Gene Silencing | Brown JM | 2019 Oct 01 |
|
| 31097425 | Plasma and Liver Protein Binding of N-Acetylgalactosamine–Conjugated Small Interfering RNA | Humphreys SC | 2019 Oct |
|
| 31270142 | In Vitro Drug-Drug Interaction Evaluation of GalNAc Conjugated siRNAs Against CYP450 Enzymes and Transporters | Ramsden D | 2019 Oct |
|
| 31766509 | A Study for the Access to a Semi-synthetic Regioisomer of Natural Fucosylated Chondroitin Sulfate with Fucosyl Branches on N-acetyl-Galactosamine Units | Vessella G | 2019 Nov 21 |
|
| 31697432 | On the structure and function of Escherichia coli YjhC: An oxidoreductase involved in bacterial sialic acid metabolism | Horne CR | 2019 Nov 21 |
|
| 31710480 | Chemically Controlled Helical Polymorphism in Protein Tubes by Selective Modulation of Supramolecular Interactions | Li Z | 2019 Nov 11 |
|
| 31682911 | Moving RNA interference beyond the liver | Schwendeman SP | 2019 Nov 10 |
|
PubAnnotation
