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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
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G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Ovis aries (sheep) | |
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Escherichia coli |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O14672 | Disintegrin and metalloproteinase domain-containing protein 10 | ||
| O14763 | Tumor necrosis factor receptor superfamily member 10B | ||
| O14773 | Tripeptidyl-peptidase 1 | ||
| O14786 | Neuropilin-1 | ||
| O14791 | Apolipoprotein L1 | ||
| O14967 | Calmegin | ||
| O15031 | Plexin-B2 | ||
| O15072 | A disintegrin and metalloproteinase with thrombospondin motifs 3 | ||
| O15230 | Laminin subunit alpha-5 | ||
| O15232 | Matrilin-3 |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| Lectin pathway of complement activation | Sus scrofa |
| Lectin pathway of complement activation | Canis familiaris |
| Lectin pathway of complement activation | Xenopus tropicalis |
| Lectin pathway of complement activation | Rattus norvegicus |
| Lectin pathway of complement activation | Homo sapiens |
| Lectin pathway of complement activation | Mus musculus |
| Lectin pathway of complement activation | Gallus gallus |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 29673805 | Effect of N-acetylgalactosamine ligand valency on targeting dendrimers to hepatic cancer cells | Kuruvilla SP | 2018 Jul 10 |
|
| 29374258 | Identification of a Golgi GPI-N-acetylgalactosamine transferase with tandem transmembrane regions in the catalytic domain | Hirata T | 2018 Jan 26 |
|
| 29277975 | Perineuronal nets in subcortical auditory nuclei of four rodent species with differing hearing ranges | Beebe NL | 2018 Jan 17 |
|
| 29303968 | Functional Expression and Characterization of the Recombinant N-Acetyl-Glucosamine/N-Acetyl-Galactosamine-Specific Marine Algal Lectin BPL3 | Hwang HJ | 2018 Jan 05 |
|
| 28988716 | Evaluation of GalNAc-siRNA Conjugate Activity in Pre-clinical Animal Models with Reduced Asialoglycoprotein Receptor Expression | Willoughby JLS | 2018 Jan 03 |
|
| 29097258 | Site-specific O -glycosylation of N-terminal serine residues by polypeptide GalNAc-transferase 2 modulates human δ-opioid receptor turnover at the plasma membrane | Lackman JJ | 2018 Jan |
|
| 29174389 | Temporal variability in lipoprotein(a) levels in patients enrolled in the placebo arms of IONIS-APO(a)Rx and IONIS-APO(a)-LRx antisense oligonucleotide clinical trials | Marcovina SM | 2018 Jan |
|
| 29459660 | Selection of GalNAc-conjugated siRNAs with limited off-target-driven rat hepatotoxicity | Janas MM | 2018 Feb 19 |
|
| 29300154 | Acinetobacter baumannii isolate BAL_212 from Vietnam produces the K57 capsular polysaccharide containing a rarely occurring amino sugar N-acetylviosamine | Kenyon JJ | 2018 Feb 01 |
|
| 29217428 | Clinical significance of GalNAcylated glycans in cholangiocarcinoma: Values for diagnosis and prognosis | Saentaweesuk W | 2018 Feb |
|
PubAnnotation
