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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Ovis aries (sheep) | |
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Escherichia coli |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q9Y2G1 | Myelin regulatory factor | ||
| Q9Y4C4 | Malignant fibrous histiocytoma-amplified sequence 1 | ||
| Q9Y4L1 | Hypoxia up-regulated protein 1 | ||
| Q9Y520 | Protein PRRC2C | ||
| Q9Y5L2 | Hypoxia-inducible lipid droplet-associated protein | ||
| Q9Y5M8 | Signal recognition particle receptor subunit beta | ||
| Q9Y5T4 | DnaJ homolog subfamily C member 15 | ||
| Q9Y5X9 | Endothelial lipase | ||
| Q9Y5Y6 | Suppressor of tumorigenicity 14 protein | ||
| Q9Y5Z0 | Beta-secretase 2 |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| Lectin pathway of complement activation | Sus scrofa |
| Lectin pathway of complement activation | Canis familiaris |
| Lectin pathway of complement activation | Xenopus tropicalis |
| Lectin pathway of complement activation | Rattus norvegicus |
| Lectin pathway of complement activation | Homo sapiens |
| Lectin pathway of complement activation | Mus musculus |
| Lectin pathway of complement activation | Gallus gallus |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 9535776 | Glycosylation of the Tandem Repeat Unit of the MUC2 Polypeptide Leading to the Synthesis of the Tn Antigen | Inoue M | 1998 Apr 07 |
|
| 9578469 | Evidence that a peptide corresponding to the rat Muc2 C‐terminus undergoes disulphide‐mediated dimerization | Bell SL | 1998 Apr 01 |
|
| 9619508 | Three Dimensional Structure of the Soybean Agglutinin-Gal/GalNAc Complexes by Homology Modeling | Rao VSR | 1998 Apr |
|
| 9857245 | Immunohistochemical study of Tn, sialosyl-Tn and T antigens in human meningiomas | Giuffre G | 1998 |
|
| 10474024 | Expression of N-Acetyl Galactosaminylated and Sialylated Glycans by Metastases Arising from Primary Breast Cancer | Brooks SA | 1998 |
|
| 9334809 | Selection of tumor antigens as targets for immune attack using immunohistochemistry: II. Blood group-related antigens | Zhang S | 1997 Sep 26 |
|
| 9315707 | Aminopeptidase dependent pore formation of Bacillus thuringiensis CrylAc toxin on Trichoplusia ni membranes | Lorence A | 1997 Sep 08 |
|
| 9327143 | Facile Synthesis of a High-Affinity Ligand for Mammalian Hepatic Lectin Containing Three Terminal N-Acetylgalactosamine Residues | Lee RT | 1997 Sep 01 |
|
| 9341141 | The glycosylation of rat intestinal Muc2 mucin varies between rat strains and the small and large intestine. A study of O-linked oligosaccharides by a mass spectrometric approach | Karlsson NG | 1997 Oct 24 |
|
| 9312074 | Localization of O-glycosylation sites on glycopeptide fragments from lactation-associated MUC1. All putative sites within the tandem repeat are glycosylation targets in vivo | Müller S | 1997 Oct 03 |
|
PubAnnotation
