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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Ovis aries (sheep) | |
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Escherichia coli |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| Q13443 | Disintegrin and metalloproteinase domain-containing protein 9 | ||
| Q13478 | Interleukin-18 receptor 1 | ||
| Q13530 | Serine incorporator 3 | ||
| Q13751 | Laminin subunit beta-3 | ||
| Q13753 | Laminin subunit gamma-2 | ||
| Q13790 | Apolipoprotein F | ||
| Q14028 | Cyclic nucleotide-gated channel beta-1 | ||
| Q14112 | Nidogen-2 | ||
| Q14114 | Low-density lipoprotein receptor-related protein 8 | ||
| Q14118 | Dystroglycan 1 |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O101 | Escherichia coli |
| E.coli O103 | Escherichia coli |
| E.coli O107 | Escherichia coli |
| E.coli O112ab | Escherichia coli |
| E.coli O112ac | Escherichia coli |
| E.coli O116 | Escherichia coli |
| E.coli O117 | Escherichia coli |
| E.coli O125ab | Escherichia coli |
| E.coli O127 | Escherichia coli |
| E.coli O128ab-H27 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 8789486 | Are Differences in the Expression of Carbohydrate-Binding Sites (Endogenous Lectins) Responsible for Recurrences of Benign Tumours of the Parotid Gland? | Steuer MK | 1995 Nov |
|
| 7755601 | A Bovine IgG Heavy-Chain Contains N-Acetylgalactosaminylated N-Linked Sugar Chains | Aoki N | 1995 May 16 |
|
| 7537516 | Expression of alpha-GalNAc glycoproteins by breast cancers | Brooks S | 1995 May |
|
| 7675511 | Study of the in vitro activation of the complement alternative pathway by Echinococcus granulosus hydatid cyst fluid | FERREIRA AM | 1995 May |
|
| 7656179 | Antifreeze glycopeptides of the high-Antarctic silverfish Pleuragramma antarcticum (Notothenioidei) | Wöhrmann APA | 1995 May |
|
| 7655164 | Letter to the Glyco-Forum Controversial iduronate ring conformation in dermatan sulphate | Rao VSR | 1995 May |
|
| 8586644 | Enzymatic Sulfation of Gangliotriaosylceramide in Human Renal Cancer Cells1 | Kobayashi T | 1995 May |
|
| 7890626 | High Affinity Binding of the Entamoeba histolytica Lectin to Polyvalent N-Acetylgalactosaminides | Adler P | 1995 Mar 10 |
|
| 7762797 | A fluorescent assay for the determination of UDP-GlcNAc: Gal beta 1,3GalNAc-R (GlcNAc to GalNAc) beta 1,6-N-acetylglucosaminyltransferase activity | Palmerini CA | 1995 Mar 01 |
|
| 7884311 | Enhancement in accessibility to macrophages by modification of mucin-type carbohydrate chains on a tumor cell line: role of a C-type lectin of macrophages | Sakamaki T | 1995 Mar 01 |
|
PubAnnotation
| Title | Authors | Source | Publication Date | PubMed ID |
|---|---|---|---|---|
| Immunological response from an entirely carbohydrate antigen: design of synthetic vaccines based on Tn-PS A1 conjugates. |
|
J Am Chem Soc | 2009 Jul 22 | 19552408 |
| Two different glycosyltransferase defects that result in GalNAc alpha-O-peptide (Tn) expression. |
|
Glycobiology | 1994 Jun | 7949653 |
| Localization of O-glycan initiation, sphingomyelin synthesis, and glucosylceramide synthesis in Vero cells with respect to the endoplasmic reticulum-Golgi intermediate compartment. |
|
J Biol Chem | 1994 Feb 11 | 8307959 |
| Carbohydrate receptor-mediated gene transfer to human T leukaemic cells. |
|
Glycobiology | 1994 Aug | 7827404 |
