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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G80858MF
Summary
- GlyTouCan ID
-
G80858MF
- IUPAC Condensed
- GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc(b1-
- Motifs
- N-Glycan complex
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 1462.54
3D Structures
G89637WE
G95238UV
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) | |
| Cricetinae (hamsters) | |
| Drosophila melanogaster (fruit fly) |
Taxonomic Hierarchy
root
cellular organisms [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| FUT8 | GDP-Fuc |
G39213VZ
|
Free |
G80858MF
|
Free | |
| MGAT4B | UDP-GlcNAc |
G80858MF
|
PA |
G61207RZ
|
PA | |
| MGAT4A | UDP-GlcNAc |
G80858MF
|
PA |
G61207RZ
|
PA | |
| MGAT4A | UDP-GlcNAc |
G80858MF
|
Asn-X |
G61207RZ
|
Asn-X | |
| MGAT3 | UDP-GlcNAc |
G80858MF
|
Asn-X |
G30159WR
|
Asn-X |
KEGG BRITE Database
G78059CC
GALAXY
G59357BZ
G65458HJ
G54219FG
G27919IH
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O15389 | Sialic acid-binding Ig-like lectin 5 | ||
| O75015 | Low affinity immunoglobulin gamma Fc region receptor III-B | ||
| P00451 | Coagulation factor VIII | ||
| P00747 | Plasminogen | ||
| P01579 | Interferon gamma | ||
| P01854 | Immunoglobulin heavy constant epsilon | ||
| P01857 | Immunoglobulin heavy constant gamma 1 | ||
| P01859 | Immunoglobulin heavy constant gamma 2 | ||
| P01860 | Immunoglobulin heavy constant gamma 3 | ||
| P01861 | Immunoglobulin heavy constant gamma 4 |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:a-dman-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:5o(6+1)9d 9:9o(2+1)10d 10:10d(2+1)11n 11:1o(6+1)12d
- WURCS
- WURCS=2.0/4,8,7/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5]/1-1-2-3-1-3-1-4/a4-b1_a6-h1_b4-c1_c3-d1_c6-f1_d2-e1_f2-g1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 7592613 | Structural Analysis of the Oligosaccharides Derived from Glycodelin, a Human Glycoprotein with Potent Immunosuppressive and Contraceptive Activities | Dell A | 1995 Oct 13 |
|
| 7785764 | Identification of neutral and sialyl N-linked oligosaccharide structures from human serum glycoproteins using three kinds of high-performance liquid chromatography | Nakagawa H | 1995 Mar 20 |
|
| 7635144 | The human UDP-N-acetylglucosamine: alpha-6-D-mannoside-beta-1,2- N-acetylglucosaminyltransferase II gene (MGAT2). Cloning of genomic DNA, localization to chromosome 14q21, expression in insect cells and purification of the recombinant protein | Tan J | 1995 Jul 15 |
|
| 7514386 | Structural Study on the Glycosyl-Phosphatidylinositol Anchor and the Asparagine-Linked Sugar Chain of a Soluble Form of CD59 in Human Urine | Nakano Y | 1994 May 15 |
|
| 7906504 | Structural characterization of the N-glycans of a humanized anti-CD18 murine immunoglobulin G | Ip CC | 1994 Feb 1 |
|
| 8507175 | Structural changes in the N-linked sugar chains of serum immunoglobulin G of HTLV-I transgenic mice | Endo T | 1993 May 14 |
|
| 7679920 | Carbohydrate structures of human alpha-fetoprotein of patients with hepatocellular carcinoma: presence of fucosylated and non-fucosylated triantennary glycans | Aoyagi Y | 1993 Mar |
|
| 7686446 | Sugar chains of human cord serum alpha-fetoprotein: characteristics of N-linked sugar chains of glycoproteins produced in human liver and hepatocellular carcinomas | Yamashita K | 1993 Jul 01 |
|
| 8344278 | Structural study of the oligosaccharide moieties of sphingolipid activator proteins, saposins A, C and D obtained from the spleen of a Gaucher patient | ITO K | 1993 Jul 01 |
|
| 7511099 | Characterization of E-PHA-reactive alpha-fetoprotein isoforms by two-dimensional lectin affinity electrophoresis | Taketa K | 1993 Dec |
|
