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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
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MIRAGE
G39213VZ
Summary
- GlyTouCan ID
-
G39213VZ
- IUPAC Condensed
- GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc(b1-
- Motifs
- N-Glycan complex
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 1316.49
External Links
- GlyConnect structure
- GlyGen
- ChEBI
- PubChem Compound
- PubChem Substance
- CarbBank
3D Structures
G84678BK
G13577LP
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Gallus gallus (chicken) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) |
Taxonomic Hierarchy
- Viruses
root
cellular organisms [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| FUT11 | GDP-Fuc |
G39213VZ
|
R |
G64669AQ
|
R | |
| FUT10 | GDP-Fuc |
G39213VZ
|
R |
G64669AQ
|
R | |
| MGAT4A | UDP-GlcNAc |
G39213VZ
|
PA |
G29011JC
|
PA | |
| MGAT3 | UDP-GlcNAc |
G39213VZ
|
Asn-X |
G59471TH
|
Asn-X | |
| MGAT4B | UDP-GlcNAc |
G39213VZ
|
PA |
G29011JC
|
PA |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| FUT11 | GDP-Fuc |
G39213VZ
|
R |
G64669AQ
|
R | |
| FUT8 | GDP-Fuc |
G39213VZ
|
Free |
G80858MF
|
Free | |
| FUT10 | GDP-Fuc |
G39213VZ
|
R |
G64669AQ
|
R | |
| MGAT4A | UDP-GlcNAc |
G39213VZ
|
PA |
G29011JC
|
PA | |
| MGAT5 | UDP-GlcNAc |
G39213VZ
|
[beta]1-Asn |
G10219AA
|
[beta]1-Asn |
KEGG BRITE Database
G88380UG
G61751GZ
G93351GM
GALAXY
G15403HX
G06063MN
G30817UY
G69912LP
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O75015 | Low affinity immunoglobulin gamma Fc region receptor III-B | ||
| P01012 | Ovalbumin | ||
| P01579 | Interferon gamma | ||
| P01857 | Immunoglobulin heavy constant gamma 1 | ||
| P01859 | Immunoglobulin heavy constant gamma 2 | ||
| P01860 | Immunoglobulin heavy constant gamma 3 | ||
| P01861 | Immunoglobulin heavy constant gamma 4 | ||
| P01876 | Immunoglobulin heavy constant alpha 1 | ||
| P01877 | Immunoglobulin heavy constant alpha 2 | ||
| P02710 | Acetylcholine receptor subunit alpha |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:a-dman-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:5o(6+1)9d 9:9o(2+1)10d 10:10d(2+1)11n
- WURCS
- WURCS=2.0/3,7,6/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-1-3-1/a4-b1_b4-c1_c3-d1_c6-f1_d2-e1_f2-g1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 7514386 | Structural Study on the Glycosyl-Phosphatidylinositol Anchor and the Asparagine-Linked Sugar Chain of a Soluble Form of CD59 in Human Urine | Nakano Y | 1994 May 15 |
|
| 8507175 | Structural changes in the N-linked sugar chains of serum immunoglobulin G of HTLV-I transgenic mice | Endo T | 1993 May 14 |
|
| 7679920 | Carbohydrate structures of human alpha-fetoprotein of patients with hepatocellular carcinoma: presence of fucosylated and non-fucosylated triantennary glycans | Aoyagi Y | 1993 Mar |
|
| 7686446 | Sugar chains of human cord serum alpha-fetoprotein: characteristics of N-linked sugar chains of glycoproteins produced in human liver and hepatocellular carcinomas | Yamashita K | 1993 Jul 01 |
|
| 8344278 | Structural study of the oligosaccharide moieties of sphingolipid activator proteins, saposins A, C and D obtained from the spleen of a Gaucher patient | ITO K | 1993 Jul 01 |
|
| 7511099 | Characterization of E-PHA-reactive alpha-fetoprotein isoforms by two-dimensional lectin affinity electrophoresis | Taketa K | 1993 Dec |
|
| 1939186 | Purification and characterization of GDP-L-fucose-N-acetyl beta-D-glucosaminide alpha 1----6fucosyltransferase from cultured human skin fibroblasts. Requirement of a specific biantennary oligosaccharide as substrate | Voynow JA | 1991 Nov 15 |
|
| 2122971 | The carbohydrate structures of a mouse monoclonal IgG antibody OKT3 | Krotkiewski H | 1990 Nov 25 |
|
| 2110822 | Characteristics of asparagine-linked sugar chains of sphingolipid activator protein 1 purified from normal human liver and GM1 gangliosidosis (type 1) liver | Yamashita K | 1990 Mar 01 |
|
| 1694115 | Unique structure of glycopeptide from alpha-fetoprotein produced in human hepatoma cell line, as determined by 1H-nuclear magnetic resonance spectroscopy | Terrana B | 1990 Jun |
|
