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GlyTouCan
Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Ovis aries (sheep) | |
| Cricetulus griseus (Chinese hamster) | |
| Mus musculus (house mouse) | |
| Bos taurus (domestic cattle) | |
| Escherichia coli |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P16422 | Epithelial cell adhesion molecule | ||
| P16860 | Natriuretic peptides B | ||
| P17813 | Endoglin | ||
| P17936 | Insulin-like growth factor-binding protein 3 | ||
| P18065 | Insulin-like growth factor-binding protein 2 | ||
| P18075 | Bone morphogenetic protein 7 | ||
| P18084 | Integrin beta-5 | ||
| P18684 | Diptericin-D | ||
| P18827 | Syndecan-1 | ||
| P18850 | Cyclic AMP-dependent transcription factor ATF-6 alpha |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O86H2K2 | Escherichia coli |
| E.coli O86H2K62 | Escherichia coli |
| E.coli O90 | Escherichia coli |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Xenopus tropicalis |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Homo sapiens |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Gallus gallus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Mus musculus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Rattus norvegicus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Bos taurus |
| Ficolins bind to repetitive carbohydrate structures on the target cell surface | Canis familiaris |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 1379037 | The chicken anterior lingual glands: Structural study of carbohydrate chains by lectins and glycosidases | Menghi G | 1992 Jun |
|
| 1308209 | The A1 (B) phenomenon: a monoclonal anti‐B (BS‐85) demonstrates low levels of B determinants on A1 red cells | Voak D | 1992 Jun |
|
| 1422133 | Application of chemically desialylated and degalactosylated human glycophorin for induction and characterization of anti-Tn monoclonal antibodies | Duk M | 1992 Jun |
|
| 1637287 | Isolation, by affinity chromatography and gel filtration in 8 <scp>m</scp>-urea, of an active subunit from the anti-(blood-group A+N)-specific lectin of Moluccella laevis | Alperin DM | 1992 Jul 01 |
|
| 1429511 | Novel Structure of the N- Acetylgalactosamine Containing N-Glycosidic Carbohydrate Chain of Batroxobin, a Thrombin-Like Snake Venom Enzyme1 | Tanaka N | 1992 Jul |
|
| 1429500 | Release of O-Linked Sugar Chains from Glycoproteins with Anhydrous Hydrazine and Pyridylamination of the Sugar Chains with Improved Reaction Conditions1 | Kuraya N | 1992 Jul |
|
| 1329310 | Analysis of tumour necrosis factor alpha-specific, lactose-specific and mistletoe lectin-specific binding sites in human lung carcinomas by labelled ligands | Kayser K | 1992 Jul |
|
| 1567169 | Monoclonal antibody 83D4 immunoreactivity in human tissues: cellular distribution and microcytophotometric analysis of immunoprecipitates on tissue sections | Charpin C | 1992 Jan-Feb |
|
| 1370803 | The clearance of apoptotic cells in the liver is mediated by the asialoglycoprotein receptor | Dini L | 1992 Jan 20 |
|
| 1378306 | Jack fruit lectin binding pattern in the exfoliative cytology of bronchopulmonary neoplasia | Pillai KR | 1992 Jan |
|
PubAnnotation
