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Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
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Standards Ontologies Notations
Guidelines
MIRAGE
G78059CC

Summary
GlyTouCan ID
G78059CC
IUPAC Condensed
Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc(b1-
Motifs
N-Glycan complex N-acetyllactosamine Type 2 LN
Subsumption Level
Fully-defined saccharide
Monoisotopic Mass
1786.65
GlyConnect structure
GlyGen
ChEBI
PubChem Compound
PubChem Substance
CarbBank
1773 2879 3892 4642 5103 5104 7353 7466 7825 7826 7827 7828 7829 7830 7831 7833 7835 7836 7927 8279 10870 10927 11940 12790 14718 20301 25177 25743 26077 29849 31875 33019 33179 35218 35291 36435 42691 44709 46603 46609 46617 46670
3D Structures
GLYCAM
DGalpb1-4DGlcpNAcb1-2DManpa1-3[DGalpb1-4DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-OH
GlycoShape
G78059CC
Displaying 1 entry
Archetype α β
G69461KL
G83522FM
G78059CC
Organisms
Displaying entries 1 - 5 of 8 in total
Organisms Evidence
Chlorocebus aethiops (grivet)
Gallus gallus (chicken)
Cricetinae (hamsters)
Mus musculus (house mouse)
Cavia porcellus (domestic guinea pig)
Taxonomic Hierarchy
GlycoGene Database (GGDB)
Displaying 1 entry
Gene Symbol Donor Acceptor Reducing terminal(Acceptor) Product Reducing terminal(Product) Reference
B3GNT2 UDP-GlcNAc
G78059CC
PA
G22865RK
PA
Displaying all 4 entries
Gene Symbol Donor Acceptor Reducing terminal(Acceptor) Reference
MGAT4A UDP-GlcNAc
G78059CC
Asn-X
B3GNT8 UDP-GlcNAc
G78059CC
PA
MGAT3 UDP-GlcNAc
G78059CC
Asn-X
B3GNT7 UDP-GlcNAc
G78059CC
PA
KEGG BRITE Database
KEGG ID
Enzyme
References
Reactions
Displaying all 2 entries
KEGG Reaction Enzyme Acceptor Product
R05990
R05989
GALAXY
Glucose Units
ODS
14.1
Amide
7.4
Degrading Enzymes
Displaying entries 16 - 20 of 25 in total
Enzyme Substrate Product
α-Sialidase
G17689DH
G78059CC
α-Sialidase
G30460NZ
G78059CC
α-Sialidase
G53752TA
G78059CC
α-Sialidase
G74107UT
G78059CC
α-Sialidase
G96921ZU
G78059CC
GALAXY: Glycoanalysis by the three axes of MS and chromatography.
Core Protein
Displaying entries 1 - 10 of 86 in total
UniProt ID Protein Name Reference Source
O75015 Low affinity immunoglobulin gamma Fc region receptor III-B
O97939 Enamelin
P00451 Coagulation factor VIII
P00533 Epidermal growth factor receptor
P00742 Coagulation factor X
P00747 Plasminogen
P00750 Tissue-type plasminogen activator
P00797 Renin
P01009 Alpha-1-antitrypsin
P01215 Glycoprotein hormones alpha chain
Sequence Descriptors
GlycoCT
RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:b-dglc-HEX-1:5
8s:n-acetyl
9b:b-dgal-HEX-1:5
10b:a-dman-HEX-1:5
11b:b-dglc-HEX-1:5
12s:n-acetyl
13b:b-dgal-HEX-1:5
14b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(3+1)6d
6:6o(2+1)7d
7:7d(2+1)8n
8:7o(4+1)9d
9:5o(6+1)10d
10:10o(2+1)11d
11:11d(2+1)12n
12:11o(4+1)13d
13:1o(6+1)14d
WURCS
WURCS=2.0/5,10,9/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5]/1-1-2-3-1-4-3-1-4-5/a4-b1_a6-j1_b4-c1_c3-d1_c6-g1_d2-e1_e4-f1_g2-h1_h4-i1
Literature
Displaying entries 61 - 70 of 122 in total
PubMed ID Title First Author Publication Date Source
7620335 Identification of the oligosaccharide structures of human coagulation factor X activation peptide at each glycosylation site Nakagawa H 1995 Apr
  • GlyGen
  • PubChem
7514386 Structural Study on the Glycosyl-Phosphatidylinositol Anchor and the Asparagine-Linked Sugar Chain of a Soluble Form of CD59 in Human Urine Nakano Y 1994 May 15
  • GlyGen
  • PubChem
8026573 Rapid and simple approach for the NMR resonance assignment of the carbohydrate chains of an intact glycoprotein Application of gradient‐enhanced natural abundance 1H‐13C HSQC and HSQC‐TOCSY to the α‐subunit of human chorionic gonadotropin de Beer T 1994 Jul 04
  • GlyGen
  • PubChem
8174273 Alteration of asparagine-linked glycosylation in serum transferrin of patients with hepatocellular carcinoma Matsumoto K 1994 Jan 14
  • GlyGen
  • PubChem
7906504 Structural characterization of the N-glycans of a humanized anti-CD18 murine immunoglobulin G Ip CC 1994 Feb 1
  • GlyGen
7944531 Carbohydrate deficient glycoprotein syndrome type II: a deficiency in Golgi localised N-acetyl-glucosaminyltransferase II Jaeken J 1994 Aug
  • GlyGen
  • PubChem
8404898 The structure of N-linked oligosaccharides of human pancreatic bile-salt-dependent lipase SUGO T 1993 Sep 15
  • GlyGen
  • PubChem
8404899 Variation of the glycosylation of human pancreatic bile-salt-dependent lipase MAS E 1993 Sep 15
  • GlyGen
  • PubChem
8251489 Structural study of the sugar chains of human leukocyte common antigen CD45 Sato T 1993 Nov 01
  • GlyGen
  • PubChem
8507175 Structural changes in the N-linked sugar chains of serum immunoglobulin G of HTLV-I transgenic mice Endo T 1993 May 14
  • GlyGen
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