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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
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G00031MO
Summary
- GlyTouCan ID
-
G00031MO
- IUPAC Condensed
- Gal(b1-3)GalNAc(a1-
- Motifs
- O-Glycan core 1 T antigen TF antigen
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 383.14
External Links
- GlyConnect structure
- GlyGen
- ChEBI
- PubChem Compound
- PubChem Substance
- CarbBank
-
- 98
- 99
- 100
- 2225
- 2226
- 2227
- 2228
- 2229
- 2230
- 2231
- 2232
- 2234
- 2235
- 2236
- 2237
- 2238
- 2239
- 2240
- 2241
- 2242
- 2243
- 3235
- 3236
- 3239
- 3240
- 3245
- 3255
- 3406
- 3795
- 3803
- 3842
- 3846
- 3903
- 4685
- 5035
- 5038
- 5203
- 5232
- 5434
- 5887
- 14321
- 20223
- 20981
- 25363
- 25729
- 25730
- 28182
- 29012
- 29046
- 29175
- 29393
- 29521
- 29709
- 30501
- 30734
- 30735
- 30848
- 30849
- 30850
- 30917
- 32646
- 33002
- 33022
- 33211
- 33469
- 33576
- 33832
- 33848
- 33851
- 33878
- 33952
- 34693
- 34766
- 34823
- 34829
- 34830
- 34986
- 34995
- 35029
- 35050
- 35069
- 35107
- 35108
- 35805
- 35833
- 35991
- 36264
- 36818
- 36826
- 36863
- 37676
- 37768
- 37770
- 38102
- 38263
- 38587
- 38640
- 38672
- 38687
- 40630
- 40825
- 40957
- 41263
- 41866
- 42208
- 42209
- 42740
- 42797
- 42875
- 43908
- 43915
- 43921
- 43923
- 43951
- 44029
- 44376
- 44505
- 44775
- 45972
- 45973
- 45974
- 45975
- 45976
- 45977
- 45978
- 45979
- 45980
- 45981
- 46056
- 46438
- 46466
- 46562
- 47015
- 47100
- 47186
- 47327
- 47600
- 47770
- 48244
- 48247
- 48891
- 49121
- 49283
- 49507
- 50477
- 50865
3D Structures
- GLYCAM
- DGalpb1-3DGalpNAca1-OH
G00032MO
G01534TU
Organisms
| Organisms | Evidence |
|---|---|
| Bacteroides ovatus | |
| Oryctolagus cuniculus (rabbit) |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G00031MO
|
Ser/Thr |
G56682BC
|
Ser/Thr | |
| ST3GAL2 | CMP-Neu5Ac |
G00031MO
|
R |
G65562ZE
|
R | |
| ST6GALNAC2 | CMP-Neu5Ac |
G00031MO
|
Ser/Thr |
G56682BC
|
Ser/Thr | |
| ST3GAL4 | CMP-Neu5Ac |
G00031MO
|
free |
G65562ZE
|
free |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| GCNT1 | UDP-GlcNAc |
G00031MO
|
Ser/Thr (core 2) |
G00033MO
|
Ser/Thr (core 2) | |
| GCNT4 | UDP-GlcNAc |
G00031MO
|
[alpha] |
G00033MO
|
[alpha] | |
| GCNT1 | UDP-GlcNAc |
G00031MO
|
G00033MO
|
|||
| GCNT1 | UDP-GlcNAc |
G00031MO
|
[alpha]-pNP |
G00033MO
|
[alpha]-pNP | |
| GCNT3 | UDP-GlcNAc |
G00031MO
|
[alpha]-pNP |
G00033MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GAL2 | CMP-Neu5Ac |
G00031MO
|
free | |
| ST6GALNAC4 | CMP-Neu5Ac |
G00031MO
|
benzyl | |
| ST6GALNAC3 | CMP-Neu5Ac |
G00031MO
|
Ser/Thr | |
| ST3GAL3 | CMP-Neu5Ac |
G00031MO
|
Antifreeze glycoprotein | |
| ST3GAL6 | CMP-Neu5Ac |
G00031MO
|
free |
KEGG BRITE Database
- KEGG ID
- Enzyme
- References
- Reactions
G28694FA
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| D9N008 | Epiglycanin | ||
| O02197 | Circulating cathodic antigen | ||
| P00743 | Coagulation factor X | ||
| P01190 | Pro-opiomelanocortin | ||
| P01215 | Glycoprotein hormones alpha chain | ||
| P01375 | Tumor necrosis factor | ||
| P01588 | Erythropoietin | ||
| P01824 | Immunoglobulin heavy variable 4-39 | ||
| P01860 | Immunoglobulin heavy constant gamma 3 | ||
| P01876 | Immunoglobulin heavy constant alpha 1 |
GlycoEpitope
- Epitope ID
- EP0020
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O107 | Escherichia coli |
| E.coli O117 | Escherichia coli |
| E.coli O185 | Escherichia coli |
| E.coli O5ab | Escherichia coli |
| E.coli O5ac | Escherichia coli |
| E.coli O70 | Escherichia coli |
| E.coli O71 | Escherichia coli |
| E.coli O83 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(3+1)3d
- WURCS
- WURCS=2.0/2,2,1/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5]/1-2/a3-b1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 14673092 | Murine and human zona pellucida 3 derived from mouse eggs express identical O-glycans | Dell A | 2003 Dec 12 |
|
| 12235148 | Characterization of the second type of human beta-galactoside alpha 2,6-sialyltransferase (ST6Gal II), which sialylates Galbeta 1,4GlcNAc structures on oligosaccharides preferentially. Genomic analysis of human sialyltransferase genes | Takashima S | 2002 Nov 29 |
|
| 12000758 | Recombinant MUC1 probe authentically reflects cell-specific O-glycosylation profiles of endogenous breast cancer mucin. High density and prevalent core 2-based glycosylation | Muller S | 2002 Jul 19 |
|
| 11677243 | Cloning and expression of human core 1 beta1,3-galactosyltransferase | Ju T | 2002 Jan 04 |
|
| 12206779 | Crystal Structure of the Jacalin–T-antigen Complex and a Comparative Study of Lectin–T-antigen Complexes | Jeyaprakash AA | 2002 Aug 23 |
|
| 11821425 | Molecular cloning and characterization of a novel UDP-GlcNAc:GalNAc-peptide beta1,3-N-acetylglucosaminyltransferase (beta 3Gn-T6), an enzyme synthesizing the core 3 structure of O-glycans | Iwai T | 2002 Apr 12 |
|
| 11501845 | Expression of mucin-associated carbohydrate core antigens in esophageal squamous cell carcinomas | Flucke U | 2001 May-Jun |
|
| 11396208 | Immunohistochemical expression of T, Tn and sialyl-Tn antigens and clinical outcome in human breast carcinoma | Imai J | 2001 Mar-Apr |
|
| 11445551 | In vivo glycosylation of mucin tandem repeats | Silverman HS | 2001 Jun |
|
| 11323440 | Molecular cloning and expression of a novel human beta-Gal-3-O-sulfotransferase that acts preferentially on N-acetyllactosamine in N- and O-glycans | Suzuki A | 2001 Jun 29 |
|
