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Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
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SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
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Standards Ontologies Notations
Guidelines
MIRAGE
G78059CC

Summary
GlyTouCan ID
G78059CC
IUPAC Condensed
Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc(b1-
Motifs
N-Glycan complex N-acetyllactosamine Type 2 LN
Subsumption Level
Fully-defined saccharide
Monoisotopic Mass
1786.65
GlyConnect structure
GlyGen
ChEBI
PubChem Compound
PubChem Substance
CarbBank
1773 2879 3892 4642 5103 5104 7353 7466 7825 7826 7827 7828 7829 7830 7831 7833 7835 7836 7927 8279 10870 10927 11940 12790 14718 20301 25177 25743 26077 29849 31875 33019 33179 35218 35291 36435 42691 44709 46603 46609 46617 46670
3D Structures
GLYCAM
DGalpb1-4DGlcpNAcb1-2DManpa1-3[DGalpb1-4DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-OH
GlycoShape
G78059CC
Displaying 1 entry
Archetype α β
G69461KL
G83522FM
G78059CC
Organisms
Displaying entries 6 - 8 of 8 in total
Organisms Evidence
Sus scrofa (pig)
Rattus norvegicus (Norway rat)
Homo sapiens (human)
Taxonomic Hierarchy
GlycoGene Database (GGDB)
Displaying 1 entry
Gene Symbol Donor Acceptor Reducing terminal(Acceptor) Product Reducing terminal(Product) Reference
B3GNT2 UDP-GlcNAc
G78059CC
PA
G22865RK
PA
Displaying all 4 entries
Gene Symbol Donor Acceptor Reducing terminal(Acceptor) Reference
MGAT4A UDP-GlcNAc
G78059CC
Asn-X
B3GNT8 UDP-GlcNAc
G78059CC
PA
MGAT3 UDP-GlcNAc
G78059CC
Asn-X
B3GNT7 UDP-GlcNAc
G78059CC
PA
KEGG BRITE Database
KEGG ID
Enzyme
References
Reactions
Displaying all 2 entries
KEGG Reaction Enzyme Acceptor Product
R05990
R05989
GALAXY
Glucose Units
ODS
14.1
Amide
7.4
Degrading Enzymes
Displaying entries 1 - 5 of 25 in total
Enzyme Substrate Product
Desulfation
G23377WN
G78059CC
Desulfation
G03864MI
G78059CC
α-Fucosidase
G78059CC
G36191CD
α-Galactosidase
G26949IX
G78059CC
α-Galactosidase
G70708LW
G78059CC
GALAXY: Glycoanalysis by the three axes of MS and chromatography.
Core Protein
Displaying entries 1 - 10 of 86 in total
UniProt ID Protein Name Reference Source
O75015 Low affinity immunoglobulin gamma Fc region receptor III-B
O97939 Enamelin
P00451 Coagulation factor VIII
P00533 Epidermal growth factor receptor
P00742 Coagulation factor X
P00747 Plasminogen
P00750 Tissue-type plasminogen activator
P00797 Renin
P01009 Alpha-1-antitrypsin
P01215 Glycoprotein hormones alpha chain
Sequence Descriptors
GlycoCT
RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:b-dglc-HEX-1:5
8s:n-acetyl
9b:b-dgal-HEX-1:5
10b:a-dman-HEX-1:5
11b:b-dglc-HEX-1:5
12s:n-acetyl
13b:b-dgal-HEX-1:5
14b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(3+1)6d
6:6o(2+1)7d
7:7d(2+1)8n
8:7o(4+1)9d
9:5o(6+1)10d
10:10o(2+1)11d
11:11d(2+1)12n
12:11o(4+1)13d
13:1o(6+1)14d
WURCS
WURCS=2.0/5,10,9/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5]/1-1-2-3-1-4-3-1-4-5/a4-b1_a6-j1_b4-c1_c3-d1_c6-g1_d2-e1_e4-f1_g2-h1_h4-i1
Literature
Displaying entries 11 - 20 of 122 in total
PubMed ID Title First Author Publication Date Source
25802287 A Microarray-Matrix-assisted Laser Desorption/Ionization-Mass Spectrometry Approach for Site-specific Protein N-glycosylation Analysis, as Demonstrated for Human Serum Immunoglobulin M (IgM) Pabst M 2015 Jun
  • GlyGen
  • PubChem
25345863 Fc Gamma Receptor Glycosylation Modulates the Binding of IgG Glycoforms: A Requirement for Stable Antibody Interactions Hayes JM 2014 Nov 11
  • GlyGen
  • PubChem
24680513 Comparison of separation techniques for the elucidation of IgG N-glycans pooled from healthy mammalian species Adamczyk B 2014 May 07
  • GlyGen
  • PubChem
24090084 Site-Specific Glycan-Peptide Analysis for Determination of N-Glycoproteome Heterogeneity Parker BL 2013 Dec 6
  • GlyGen
  • PubChem
21609021 Mass Spectrometric Determination of IgG Subclass-Specific Glycosylation Profiles in Siblings Discordant for Myositis Syndromes Perdivara I 2011 Jul 1
  • GlyGen
  • PubChem
20578731 Identification of N-glycosylation changes in the CSF and serum in patients with schizophrenia Stanta Johannes L 2010-09-03
  • GlyGen
20131323 Identification of N-glycans from Ebola virus glycoproteins by matrix-assisted laser desorption/ionisation time-of-flight and negative ion electrospray tandem mass spectrometry Ritchie G 2010 Feb 03
  • GlyGen
14693911 Site-specific N-glycosylation of chicken serum IgG Suzuki Noriko 2004-03
  • GlyGen
15620693 A novel β1,3‐N‐acetylglucosaminyltransferase (β3Gn‐T8), which synthesizes poly‐N‐acetyllactosamine, is dramatically upregulated in colon cancer Ishida H 2004 Nov 28
  • PubChem
15316280 Abnormal biantennary sugar chains are expressed in human chorionic gonadotropin produced in the choriocarcinoma cell line, JEG-3 Takamatsu S 2004
  • GlyGen
  • PubChem
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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

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Last updated: December 8, 2025