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Repository for lectin-assisted multimodality data
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Other Information
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Standards Ontologies Notations
Guidelines
MIRAGE
G78059CC

Summary
GlyTouCan ID
G78059CC
IUPAC Condensed
Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc(b1-
Motifs
N-Glycan complex N-acetyllactosamine Type 2 LN
Subsumption Level
Fully-defined saccharide
Monoisotopic Mass
1786.65
GlyConnect structure
GlyGen
ChEBI
PubChem Compound
PubChem Substance
CarbBank
1773 2879 3892 4642 5103 5104 7353 7466 7825 7826 7827 7828 7829 7830 7831 7833 7835 7836 7927 8279 10870 10927 11940 12790 14718 20301 25177 25743 26077 29849 31875 33019 33179 35218 35291 36435 42691 44709 46603 46609 46617 46670
3D Structures
GLYCAM
DGalpb1-4DGlcpNAcb1-2DManpa1-3[DGalpb1-4DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-OH
GlycoShape
G78059CC
Displaying 1 entry
Archetype α β
G69461KL
G83522FM
G78059CC
Organisms
Displaying entries 6 - 8 of 8 in total
Organisms Evidence
Sus scrofa (pig)
Rattus norvegicus (Norway rat)
Homo sapiens (human)
Taxonomic Hierarchy
GlycoGene Database (GGDB)
Displaying 1 entry
Gene Symbol Donor Acceptor Reducing terminal(Acceptor) Product Reducing terminal(Product) Reference
B3GNT2 UDP-GlcNAc
G78059CC
PA
G22865RK
PA
Displaying all 4 entries
Gene Symbol Donor Acceptor Reducing terminal(Acceptor) Reference
MGAT4A UDP-GlcNAc
G78059CC
Asn-X
B3GNT8 UDP-GlcNAc
G78059CC
PA
MGAT3 UDP-GlcNAc
G78059CC
Asn-X
B3GNT7 UDP-GlcNAc
G78059CC
PA
KEGG BRITE Database
KEGG ID
Enzyme
References
Reactions
Displaying all 2 entries
KEGG Reaction Enzyme Acceptor Product
R05990
R05989
GALAXY
Glucose Units
ODS
14.1
Amide
7.4
Degrading Enzymes
Displaying entries 1 - 5 of 25 in total
Enzyme Substrate Product
Desulfation
G23377WN
G78059CC
Desulfation
G03864MI
G78059CC
α-Fucosidase
G78059CC
G36191CD
α-Galactosidase
G26949IX
G78059CC
α-Galactosidase
G70708LW
G78059CC
GALAXY: Glycoanalysis by the three axes of MS and chromatography.
Core Protein
Displaying entries 1 - 10 of 86 in total
UniProt ID Protein Name Reference Source
O75015 Low affinity immunoglobulin gamma Fc region receptor III-B
O97939 Enamelin
P00451 Coagulation factor VIII
P00533 Epidermal growth factor receptor
P00742 Coagulation factor X
P00747 Plasminogen
P00750 Tissue-type plasminogen activator
P00797 Renin
P01009 Alpha-1-antitrypsin
P01215 Glycoprotein hormones alpha chain
Sequence Descriptors
GlycoCT
RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:b-dglc-HEX-1:5
8s:n-acetyl
9b:b-dgal-HEX-1:5
10b:a-dman-HEX-1:5
11b:b-dglc-HEX-1:5
12s:n-acetyl
13b:b-dgal-HEX-1:5
14b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(3+1)6d
6:6o(2+1)7d
7:7d(2+1)8n
8:7o(4+1)9d
9:5o(6+1)10d
10:10o(2+1)11d
11:11d(2+1)12n
12:11o(4+1)13d
13:1o(6+1)14d
WURCS
WURCS=2.0/5,10,9/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5]/1-1-2-3-1-4-3-1-4-5/a4-b1_a6-j1_b4-c1_c3-d1_c6-g1_d2-e1_e4-f1_g2-h1_h4-i1
Literature
Displaying entries 81 - 90 of 122 in total
PubMed ID Title First Author Publication Date Source
1388166 The asparagine-linked oligosaccharides on tissue factor pathway inhibitor terminate with SO4-4GalNAc beta 1, 4GlcNAc beta 1,2 Mana alpha Smith PL 1992 Sep 25
  • GlyGen
  • PubChem
1456441 N-glycosylation site mapping of human serotransferrin by serial lectin affinity chromatography, fast atom bombardment-mass spectrometry, and 1H nuclear magnetic resonance spectroscopy Fu D 1992 Oct
  • GlyGen
  • PubChem
1577715 Structures of the asparagine-linked oligosaccharide chains of human von Willebrand factor. Occurrence of blood group A, B, and H(O) structures Matsui T 1992 May 05
  • GlyGen
  • PubChem
1639758 A Simple Method for the Release of Asparagine-Linked Oligosaccharides from a Glycoprotein Purified by SDS-Polyacrylamide Gel Electrophoresis Kawashima H 1992 May
  • GlyGen
  • PubChem
1551388 Structural analysis of the N-linked carbohydrate chains of the 55-kDa glycoprotein family (PZP3) from porcine zona pellucida NOGUCHI S 1992 Mar 15
  • GlyGen
  • PubChem
1637829 Characterization of the oligosaccharide structures on recombinant human prorenin expressed in Chinese hamster ovary cells Aeed PA 1992 Aug 04
  • GlyGen
  • PubChem
1374031 The carbohydrate chains of the beta subunit of human chorionic gonadotropin produced by the choriocarcinoma cell line BeWo. Novel O-linked and novel bisecting-GlcNAc-containing N-linked carbohydrates Hard K 1992 Apr 15
  • GlyGen
  • PubChem
1555586 Structure of the N-linked oligosaccharides of the human transferrin receptor ORBERGER G 1992 Apr 01
  • GlyGen
  • PubChem
1998670 Neutral oligosaccharide structures linked to asparagines of porcine zona pellucida glycoproteins Mori E 1991-02-26
  • GlyGen
1898343 Carbohydrate structure of human pancreatic elastase 1 Wendorf P 1991 Sep 01
  • GlyGen
  • PubChem
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