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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
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G57321FI
Summary
- GlyTouCan ID
-
G57321FI
- IUPAC Condensed
- GalNAc(a1-
- Motifs
- Tn antigen
Organisms
| Organisms | Evidence |
|---|---|
| Human immunodeficiency virus 1 |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
Opisthokonta [inference]
Metazoa (metazoans) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| B3GNT6 | UDP-GlcNAc |
G57321FI
|
[alpha]-pNP |
G00035MO
|
[alpha]-pNP |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| C1GALT1 | (not applicable) |
G57321FI
|
Ser/Thr |
G00031MO
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
G36123IU
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G57321FI
|
benzyl |
G36123IU
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
O-glycan Synthesis |
G36123IU
|
O-glycan Synthesis | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[Ala-Thr(*)-Ala]2-7 |
G36123IU
|
[Ala-Thr(*)-Ala]2-7 |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Reference |
|---|---|---|---|---|
| ST6GALNAC3 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr | |
| ST6GAL2 | CMP-Neu5Ac |
G57321FI
|
para-nitrophenol | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
benzyl | |
| ST6GALNAC1 | CMP-Neu5Ac |
G57321FI
|
[alpha]-Bz | |
| ST6GALNAC2 | CMP-Neu5Ac |
G57321FI
|
Ser/Thr |
KEGG BRITE Database
G00041MO
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| O96005 | Putative lipid scramblase CLPTM1 | ||
| P00450 | Ceruloplasmin | ||
| P00734 | Prothrombin | ||
| P00740 | Coagulation factor IX | ||
| P00742 | Coagulation factor X | ||
| P00747 | Plasminogen | ||
| P00748 | Coagulation factor XII | ||
| P00749 | Urokinase-type plasminogen activator | ||
| P00750 | Tissue-type plasminogen activator | ||
| P00751 | Complement factor B |
GlycoEpitope
- Epitope ID
- EP0021
Pathway
| Pathway Name | Organism |
|---|---|
| E.coli O101 | Escherichia coli |
| E.coli O103 | Escherichia coli |
| E.coli O107 | Escherichia coli |
| E.coli O112ab | Escherichia coli |
| E.coli O112ac | Escherichia coli |
| E.coli O116 | Escherichia coli |
| E.coli O117 | Escherichia coli |
| E.coli O125ab | Escherichia coli |
| E.coli O127 | Escherichia coli |
| E.coli O128ab-H27 | Escherichia coli |
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl LIN 1:1d(2+1)2n
- WURCS
- WURCS=2.0/1,1,0/[a2112h-1a_1-5_2*NCC/3=O]/1/
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 9930619 | Developmental changes of sugar occurrence and distribution in the rat submandibular and sublingual glands | Accili D | 1999 Jan 07 |
|
| 9858491 | The Role of Carbohydrates in the Induction of the Acrosome Reaction in Mouse Spermatozoa1 | Loeser CR | 1999 Jan 01 |
|
| 9847232 | O-GLYCBASE version 4.0: a revised database of O-glycosylated proteins | Gupta R | 1999 Jan 01 |
|
| 10027964 | Domain III of the Bacillus thuringiensis delta‐endotoxin Cry1Ac is involved in binding to Manduca sexta brush border membranes and to its purified aminopeptidase N | De Maagd RA | 1999 Jan |
|
| 10573609 | Binding Patterns of Lectins with GalNAc specificity in the mouse dorsal root ganglia and spinal cord | Guerrero-Tarragó M | 1999 Jan |
|
| 9950144 | A Lectin Binding Analysis of Glycosylation Patterns During Development of the Equine Placenta | Jones CJ | 1999 Jan |
|
| 10487958 | Corneal wound-associated glycoconjugates analyzed by lectin histochemistry | Sweatt AJ | 1999 Jan |
|
| 10024453 | The crystal structure of lignin peroxidase at 1.70 Å resolution reveals a hydroxy group on the C β of tryptophan 171: A novel radical site formed during the redox cycle 1 1Edited by R. Huber | Choinowski T | 1999 Feb 26 |
|
| 9988682 | Control of O-glycan branch formation. Molecular cloning of human cDNA encoding a novel beta1,6-N-acetylglucosaminyltransferase forming core 2 and core 4 | Schwientek T | 1999 Feb 19 |
|
| 10037148 | Binding partners for the myelin‐associated glycoprotein of N2A neuroblastoma cells | Strenge K | 1999 Feb 05 |
|
PubAnnotation
