GlyCosmos Portal

Mus musculus (house mouse)

Summary

Taxonomy ID: 10090
PubChem Taxonomy: 10090

Genes (6551) Glycans (1270) Glycoproteins (10560) Lectins (248) Pathways (1301)

Displaying entries **101 - 125** of **1301** in total

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Pathway Name	Protein Name	UniProt ID ▲	Gene Symbol	GlyTouCan ID
Condensation of Prophase Chromosomes	Condensin-2 complex subunit D3 Condensin-2 complex subunit G2 Condensin-2 complex subunit H2 Cyclin-dependent kinase 1 G2/mitotic-specific cyclin-B1 Histone H2A type 1-B Histone H2A type 1-C Histone H2A type 1-E Histone H2A type 1-F Histone H2A type 1-G Histone H2A type 1-H Histone H2A type 1-I Histone H2A type 1-K Histone H2A type 1-N Histone H2A type 1-O Histone H2A type 1-P Histone H2A type 2-A Histone H2A type 2-C Histone H2A.J Histone H2A.V Histone H2A Histone H2A Histone H2A Histone H2AX Histone H2B type 1-A Histone H2B type 1-B Histone H2B type 1-C/E/G Histone H2B type 1-F/J/L Histone H2B type 1-H Histone H2B type 1-K Histone H2B type 1-M Histone H2B type 1-P Histone H2B type 2-E Histone H2B type 3-B Histone H3.1 Histone H3.2 Histone H3.3 Histone H3 Histone H4 Microcephalin Protein SET Retinoblastoma-associated protein Serine/threonine-protein kinase PLK1 Structural maintenance of chromosomes protein 2 Structural maintenance of chromosomes protein 4	A0A8I4SYN6 C0HKE1 C0HKE2 C0HKE4 C0HKE5 C0HKE6 C0HKE7 C0HKE8 C0HKE9 P10853 P10854 P11440 P13405 P24860 P27661 P62806 P68433 P70696 P84228 P84244 Q07832 Q3THW5 Q64475 Q64478 Q64523 Q64524 Q6DFV1 Q6GSS7 Q6ZQK0 Q6ZWY9 Q7TT79 Q8BSP2 Q8CG47 Q8CG48 Q8CGP0 Q8CGP1 Q8CGP2 Q8CGP5 Q8CGP6 Q8CGP7 Q8R1M2 Q9EQU5 S4R1E0 S4R1G7 S4R1M3	Capc Cape Ccn-2 Ccnb1 Ccnb1-rs13 Cdc2 Cdc2a Cdk1 Cdkn1 Cycb Cycb1 D15Ertd785e Fin16 Gm14920 H2a.x H2ab1 H2ab2 H2ab3 H2ac11 H2ac12 H2ac13 H2ac15 H2ac20 H2ac4 H2ac6 H2ac8 H2afv H2afx H2aj H2av H2ax H2az2 H2b-f H2b-j H2b-l H2b-n H2bc1 H2bc11 H2bc12 H2bc13 H2bc14 H2bc15 H2bc21 H2bc26 H2bc26-ps H2bc3 H2bc4 H2bc6 H2bc7 H2bc8 H2bc9 H2bu1 H2bu1-ps H3-143 H3-3a H3-3b H3-53 H3-B H3-F H3.1-221 H3.1-291 H3.1-I H3.2 H3.2-221 H3.2-614 H3.2-615 H3.2-616 H3.3a H3.3b H3a H3b H3c1 H3c10 H3c11 H3c13 H3c14 H3c15 H3c2 H3c3 H3c4 H3c6 H3c7 H3c8 H3f H3f3a H3f3b H3f4 H3g H3h H3i H4-12 H4-53 H4c1 H4c11 H4c12 H4c14 H4c16 H4c2 H4c3 H4c4 H4c6 H4c8 H4c9 H4f16 Hist1h2ab Hist1h2ac Hist1h2ae Hist1h2af Hist1h2ag Hist1h2ah Hist1h2ai Hist1h2ak Hist1h2an Hist1h2ao Hist1h2ap Hist1h2ba Hist1h2bb Hist1h2bc Hist1h2be Hist1h2bf Hist1h2bg Hist1h2bh Hist1h2bj Hist1h2bk Hist1h2bl Hist1h2bm Hist1h2bn Hist1h2bp Hist1h3a Hist1h3b Hist1h3c Hist1h3d Hist1h3e Hist1h3f Hist1h3g Hist1h3h Hist1h3i Hist1h4a Hist1h4b Hist1h4c Hist1h4d Hist1h4f Hist1h4h Hist1h4i Hist1h4j Hist1h4k Hist1h4m Hist2h2aa1 Hist2h2aa2 Hist2h2ab Hist2h2ac Hist2h2be Hist2h3b Hist2h3c1 Hist2h3c2 Hist2h3ca1 Hist2h3ca2 Hist2h4 Hist2h4a Hist3h2bb Hist3h2bb-ps Hist4h4 Hist5-2ax Kiaa0056 Luzp5 Mcph1 Mtb Ncapd3 Ncapg2 Ncaph2 Plk Plk1 Rb-1 Rb1 Set Smc2 Smc2l1 Smc4 Smc4l1 Th2b
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks	Amyloid beta precursor protein binding family B member 1 BRCA1-A complex subunit Abraxas 1 BRCA1-A complex subunit RAP80 BRCA1-associated RING domain protein 1 BRISC and BRCA1-A complex member 1 BRISC and BRCA1-A complex member 2 Breast cancer type 1 susceptibility protein homolog Cellular tumor antigen p53 DNA repair protein RAD50 Double-strand break repair protein MRE11 E3 SUMO-protein ligase PIAS4 E3 ubiquitin-protein ligase HERC2 E3 ubiquitin-protein ligase RNF168 E3 ubiquitin-protein ligase RNF8 Eyes absent homolog 1 Eyes absent homolog 2 Eyes absent homolog 3 Eyes absent homolog 4 Histone H2AX Histone H2B type 1-A Histone H2B type 1-B Histone H2B type 1-C/E/G Histone H2B type 1-F/J/L Histone H2B type 1-H Histone H2B type 1-K Histone H2B type 1-M Histone H2B type 1-P Histone H2B type 2-E Histone H2B type 3-B Histone H3 Histone H4 Histone acetyltransferase KAT5 Histone-lysine N-methyltransferase NSD2 Lys-63-specific deubiquitinase BRCC36 Lysine-specific demethylase 4A Lysine-specific demethylase 4B Mediator of DNA damage checkpoint protein 1 Mitogen-activated protein kinase 8 Nibrin Polyubiquitin-B Polyubiquitin-C SUMO-conjugating enzyme UBC9 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 Serine-protein kinase ATM Serine/threonine-protein kinase Chk2 Serine/threonine-protein phosphatase 5 Small ubiquitin-related modifier 1 TP53-binding protein 1 Tyrosine-protein kinase ABL1 Tyrosine-protein kinase BAZ1B UBX domain-containing protein 1 Ubiquitin carboxyl-terminal hydrolase BAP1 Ubiquitin-conjugating enzyme E2 N Ubiquitin-conjugating enzyme E2 variant 2 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	A0A8I4SYN6 O08575 O70445 P00520 P02340 P0CG49 P0CG50 P10853 P10854 P27661 P46737 P48754 P61089 P62806 P62983 P62984 P63166 P63280 P70388 P70399 P70696 P97480 P97767 Q3UI43 Q4U2R1 Q5PSV9 Q5U5Q9 Q60676 Q61216 Q62388 Q64475 Q64478 Q64524 Q6ZWY9 Q80XJ2 Q8BPZ8 Q8BVE8 Q8BW72 Q8CGP0 Q8CGP1 Q8CGP2 Q8CHK4 Q8K3W0 Q8VC56 Q91VY5 Q91Y86 Q91ZW3 Q922Y1 Q99PU7 Q9D2M8 Q9JM05 Q9QXJ1 Q9R207 Q9Z191 Q9Z265 Q9Z277	Abl Abl1 Abra1 Abraxas1 Apbb1 Atm Babam1 Babam2 Bap1 Bard1 Baz1b Blu Brca1 Brcc3 Brcc36 Bre C6.1a Ccdc98 Chek2 Chk2 D19Ertd721e Eab1 Eya1 Eya2 Eya3 Eya4 Fam175a Fe65 H2a.x H2afx H2ax H2b-f H2b-j H2b-l H2b-n H2bc1 H2bc11 H2bc12 H2bc13 H2bc14 H2bc15 H2bc21 H2bc26 H2bc26-ps H2bc3 H2bc4 H2bc6 H2bc7 H2bc8 H2bc9 H2bu1 H2bu1-ps H3f4 H4-12 H4-53 H4c1 H4c11 H4c12 H4c14 H4c16 H4c2 H4c3 H4c4 H4c6 H4c8 H4c9 H4f16 Herc2 Hist1h2ba Hist1h2bb Hist1h2bc Hist1h2be Hist1h2bf Hist1h2bg Hist1h2bh Hist1h2bj Hist1h2bk Hist1h2bl Hist1h2bm Hist1h2bn Hist1h2bp Hist1h4a Hist1h4b Hist1h4c Hist1h4d Hist1h4f Hist1h4h Hist1h4i Hist1h4j Hist1h4k Hist1h4m Hist2h2be Hist2h4 Hist2h4a Hist3h2bb Hist3h2bb-ps Hist4h4 Hist5-2ax Htatip Jdf2 Jhdm3a Jhdm3b Jmjd2 Jmjd2a Jmjd2b Jnk1 Kat5 Kdm4a Kdm4b Kiaa0170 Kiaa0272 Kiaa0393 Kiaa0677 Kiaa1090 Mapk8 Mdc1 Merit40 Mms2 Mre11 Mre11a Nba1 Nbn Nbs1 Nsd2 P53 Pias4 Piasg Ppp5c Prkm8 Rad50 Rad53 Rap80 Rip110 Rir Rjs Rnf168 Rnf8 Rps27a Rxrip110 Saks1 Smarca5 Smt3c Smt3h3 Snf2h Sumo1 Th2b Tip60 Tp53 Tp53bp1 Trp53 Trp53bp1 Uba52 Uba80 Ubb Ubc Ubc9 Ubce2i Ubce9 Ubcep1 Ubcep2 Ube2i Ube2n Ube2v2 Ubl1 Ubxn1 Uev2 Uimc1 Wbscr9 Whsc1 Wstf
G2/M DNA damage checkpoint	ATR-interacting protein BRCA1-A complex subunit Abraxas 1 BRCA1-A complex subunit RAP80 BRCA1-associated RING domain protein 1 BRISC and BRCA1-A complex member 1 BRISC and BRCA1-A complex member 2 Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN Breast cancer type 1 susceptibility protein homolog Cell cycle checkpoint control protein RAD9A Cell cycle checkpoint control protein RAD9B Cell cycle checkpoint protein RAD17 Cell cycle checkpoint protein RAD1 Cellular tumor antigen p53 Checkpoint protein HUS1 DNA endonuclease RBBP8 DNA repair protein RAD50 DNA replication ATP-dependent helicase/nuclease DNA2 DNA topoisomerase 2-binding protein 1 DNA topoisomerase 3-alpha Double-strand break repair protein MRE11 E3 SUMO-protein ligase PIAS4 E3 ubiquitin-protein ligase HERC2 E3 ubiquitin-protein ligase RNF168 E3 ubiquitin-protein ligase RNF8 Exonuclease 1 Fanconi anemia group J protein homolog Histone H2AX Histone H2B type 1-A Histone H2B type 1-B Histone H2B type 1-C/E/G Histone H2B type 1-F/J/L Histone H2B type 1-H Histone H2B type 1-K Histone H2B type 1-M Histone H2B type 1-P Histone H2B type 2-E Histone H2B type 3-B Histone H3 Histone H4 Histone acetyltransferase KAT5 Histone-lysine N-methyltransferase NSD2 Lys-63-specific deubiquitinase BRCC36 Mediator of DNA damage checkpoint protein 1 Nibrin RAD9, HUS1, RAD1-interacting nuclear orphan protein 1 RecQ-like DNA helicase BLM RecQ-mediated genome instability protein 1 RecQ-mediated genome instability protein 2 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit Serine-protein kinase ATM Serine/threonine-protein kinase ATR Serine/threonine-protein kinase Chk1 Serine/threonine-protein kinase Chk2 TP53-binding protein 1 Ubiquitin-conjugating enzyme E2 N Ubiquitin-conjugating enzyme E2 variant 2	A0A8I4SYN6 O09053 O35280 O70157 O70445 O88700 P02340 P10853 P10854 P27661 P46737 P48754 P61089 P62806 P70388 P70399 P70696 Q3UI43 Q3UPE3 Q4U2R1 Q5PSV9 Q5SXJ3 Q5U5Q9 Q61216 Q62193 Q62388 Q64475 Q64478 Q64524 Q6NXW6 Q6WBX7 Q6ZQF0 Q6ZQJ5 Q6ZWY9 Q80XJ2 Q80YR6 Q8BMG1 Q8BPZ8 Q8BQY8 Q8BVE8 Q8CGP0 Q8CGP1 Q8CGP2 Q8CHK4 Q8K3A4 Q8K3W0 Q8R323 Q8VC56 Q8VEE4 Q99J62 Q9CQ71 Q9D0F6 Q9D2M8 Q9D4G9 Q9JKK8 Q9JM05 Q9QWZ1 Q9QZ11 Q9R207 Q9WUK4 Q9Z0F6 Q9Z265	Abra1 Abraxas1 Atm Atr Atrip Babam1 Babam2 Bach1 Bard1 Blm Blu Brca1 Brcc3 Brcc36 Bre Brip1 C6.1a Ccdc98 Chek1 Chek2 Chk1 Chk2 Ctip Dna2 Dna2l Exo1 Fam175a Fancj Gm929 H2a.x H2afx H2ax H2b-f H2b-j H2b-l H2b-n H2bc1 H2bc11 H2bc12 H2bc13 H2bc14 H2bc15 H2bc21 H2bc26 H2bc26-ps H2bc3 H2bc4 H2bc6 H2bc7 H2bc8 H2bc9 H2bu1 H2bu1-ps H3f4 H4-12 H4-53 H4c1 H4c11 H4c12 H4c14 H4c16 H4c2 H4c3 H4c4 H4c6 H4c8 H4c9 H4f16 Herc2 Hist1h2ba Hist1h2bb Hist1h2bc Hist1h2be Hist1h2bf Hist1h2bg Hist1h2bh Hist1h2bj Hist1h2bk Hist1h2bl Hist1h2bm Hist1h2bn Hist1h2bp Hist1h4a Hist1h4b Hist1h4c Hist1h4d Hist1h4f Hist1h4h Hist1h4i Hist1h4j Hist1h4k Hist1h4m Hist2h2be Hist2h4 Hist2h4a Hist3h2bb Hist3h2bb-ps Hist4h4 Hist5-2ax Htatip Hus1 Jdf2 Kat5 Kiaa0083 Kiaa0170 Kiaa0259 Kiaa0393 Kiaa1090 Kiaa4069 Mdc1 Merit40 Mms2 Mre11 Mre11a Nba1 Nbn Nbs1 Nsd2 P53 Pias4 Piasg Rad1 Rad17 Rad50 Rad53 Rad9 Rad9a Rad9b Rap80 Rbbp8 Rec1 Rfc2 Rfc3 Rfc4 Rfc5 Rhno1 Rip110 Rjs Rmi1 Rmi2 Rnf168 Rnf8 Rpa1 Rpa2 Rpa3 Rpa34 Rxrip110 Th2b Tip60 Top3 Top3a Topbp1 Tp53 Tp53bp1 Trp53 Trp53bp1 Ube2n Ube2v2 Uev2 Uimc1 Whsc1 Wrn
Processing of DNA double-strand break ends	ATR-interacting protein BRCA1-A complex subunit Abraxas 1 BRCA1-A complex subunit RAP80 BRCA1-associated RING domain protein 1 BRISC and BRCA1-A complex member 1 BRISC and BRCA1-A complex member 2 Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN Breast cancer type 1 susceptibility protein homolog Cell cycle checkpoint control protein RAD9A Cell cycle checkpoint control protein RAD9B Cell cycle checkpoint protein RAD17 Cell cycle checkpoint protein RAD1 Checkpoint protein HUS1 Claspin Cyclin-A1 Cyclin-A2 Cyclin-dependent kinase 2 DNA endonuclease RBBP8 DNA repair protein RAD50 DNA replication ATP-dependent helicase/nuclease DNA2 DNA topoisomerase 2-binding protein 1 DNA topoisomerase 3-alpha Double-strand break repair protein MRE11 E3 SUMO-protein ligase PIAS4 E3 ubiquitin-protein ligase HERC2 E3 ubiquitin-protein ligase RNF168 E3 ubiquitin-protein ligase RNF4 E3 ubiquitin-protein ligase RNF8 Exonuclease 1 Fanconi anemia group J protein homolog Histone H2AX Histone H2B type 1-A Histone H2B type 1-B Histone H2B type 1-C/E/G Histone H2B type 1-F/J/L Histone H2B type 1-H Histone H2B type 1-K Histone H2B type 1-M Histone H2B type 1-P Histone H2B type 2-E Histone H2B type 3-B Histone H3 Histone H4 Histone acetyltransferase KAT5 Histone-lysine N-methyltransferase NSD2 Lys-63-specific deubiquitinase BRCC36 Mediator of DNA damage checkpoint protein 1 NAD-dependent protein deacylase sirtuin-6 Nibrin Polyubiquitin-B Polyubiquitin-C Protein timeless homolog RAD9, HUS1, RAD1-interacting nuclear orphan protein 1 RecQ-like DNA helicase BLM RecQ-mediated genome instability protein 1 RecQ-mediated genome instability protein 2 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit SUMO-conjugating enzyme UBC9 Serine-protein kinase ATM Serine/threonine-protein kinase ATR Serine/threonine-protein kinase Chk1 Serine/threonine-protein phosphatase 4 catalytic subunit Serine/threonine-protein phosphatase 4 regulatory subunit 2 Small ubiquitin-related modifier 2 TIMELESS-interacting protein TP53-binding protein 1 Ubiquitin-conjugating enzyme E2 N Ubiquitin-conjugating enzyme E2 variant 2 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	A0A8I4SYN6 O09053 O35280 O70157 O70445 O88700 P0CG49 P0CG50 P10853 P10854 P27661 P46737 P48754 P51943 P59941 P61089 P61957 P62806 P62983 P62984 P63280 P70388 P70399 P70696 P97377 P97470 Q0VGB7 Q3UI43 Q3UPE3 Q4U2R1 Q5PSV9 Q5SXJ3 Q5U5Q9 Q61216 Q61456 Q62193 Q62388 Q64475 Q64478 Q64524 Q6NXW6 Q6WBX7 Q6ZQF0 Q6ZQJ5 Q6ZWY9 Q80XJ2 Q80YR6 Q80YR7 Q8BMG1 Q8BPZ8 Q8BQY8 Q8BVE8 Q8CGP0 Q8CGP1 Q8CGP2 Q8CHK4 Q8K3A4 Q8K3W0 Q8R323 Q8VC56 Q8VEE4 Q91WA1 Q99J62 Q9CQ71 Q9D0F6 Q9D2M8 Q9D4G9 Q9JKK8 Q9JM05 Q9QWZ1 Q9QZ11 Q9QZS2 Q9R1X4 Q9R207 Q9WUK4 Q9Z0F6	Abra1 Abraxas1 Atm Atr Atrip Babam1 Babam2 Bach1 Bard1 Blm Blu Brca1 Brcc3 Brcc36 Bre Brip1 C6.1a Ccdc98 Ccna Ccna1 Ccna2 Cdk2 Cdkn2 Chek1 Chk1 Clspn Ctip Cyca Cyca2 Dna2 Dna2l Exo1 Fam175a Fancj Gm929 H2a.x H2afx H2ax H2b-f H2b-j H2b-l H2b-n H2bc1 H2bc11 H2bc12 H2bc13 H2bc14 H2bc15 H2bc21 H2bc26 H2bc26-ps H2bc3 H2bc4 H2bc6 H2bc7 H2bc8 H2bc9 H2bu1 H2bu1-ps H3f4 H4-12 H4-53 H4c1 H4c11 H4c12 H4c14 H4c16 H4c2 H4c3 H4c4 H4c6 H4c8 H4c9 H4f16 Herc2 Hist1h2ba Hist1h2bb Hist1h2bc Hist1h2be Hist1h2bf Hist1h2bg Hist1h2bh Hist1h2bj Hist1h2bk Hist1h2bl Hist1h2bm Hist1h2bn Hist1h2bp Hist1h4a Hist1h4b Hist1h4c Hist1h4d Hist1h4f Hist1h4h Hist1h4i Hist1h4j Hist1h4k Hist1h4m Hist2h2be Hist2h4 Hist2h4a Hist3h2bb Hist3h2bb-ps Hist4h4 Hist5-2ax Htatip Hus1 Jdf2 Kat5 Kiaa0083 Kiaa0170 Kiaa0259 Kiaa0393 Kiaa1090 Kiaa4069 Mdc1 Merit40 Mms2 Mre11 Mre11a Nba1 Nbn Nbs1 Nsd2 Pias4 Piasg Ppp4 Ppp4c Ppp4r2 Ppx Rad1 Rad17 Rad50 Rad9 Rad9a Rad9b Rap80 Rbbp8 Rec1 Rfc2 Rfc3 Rfc4 Rfc5 Rhno1 Rip110 Rjs Rmi1 Rmi2 Rnf168 Rnf4 Rnf8 Rpa1 Rpa2 Rpa3 Rpa34 Rps27a Rxrip110 Sir2l6 Sirt6 Smt3b Smt3h2 Sumo2 Th2b Tim1 Timeless Timeless1 Tip60 Tipin Top3 Top3a Topbp1 Tp53bp1 Trp53bp1 Uba52 Uba80 Ubb Ubc Ubc9 Ubce2i Ubce9 Ubcep1 Ubcep2 Ube2i Ube2n Ube2v2 Uev2 Uimc1 Whsc1 Wrn
Nonhomologous End-Joining (NHEJ)	BRCA1-A complex subunit Abraxas 1 BRCA1-A complex subunit RAP80 BRCA1-associated RING domain protein 1 BRISC and BRCA1-A complex member 1 BRISC and BRCA1-A complex member 2 Breast cancer type 1 susceptibility protein homolog DNA ligase 4 DNA polymerase lambda DNA repair protein RAD50 DNA repair protein XRCC4 DNA-dependent protein kinase catalytic subunit DNA-directed DNA/RNA polymerase mu Double-strand break repair protein MRE11 E3 SUMO-protein ligase PIAS4 E3 ubiquitin-protein ligase HERC2 E3 ubiquitin-protein ligase RNF168 E3 ubiquitin-protein ligase RNF8 Histone H2AX Histone H2B type 1-A Histone H2B type 1-B Histone H2B type 1-C/E/G Histone H2B type 1-F/J/L Histone H2B type 1-H Histone H2B type 1-K Histone H2B type 1-M Histone H2B type 1-P Histone H2B type 2-E Histone H2B type 3-B Histone H3 Histone H4 Histone acetyltransferase KAT5 Histone-lysine N-methyltransferase NSD2 Lys-63-specific deubiquitinase BRCC36 Mediator of DNA damage checkpoint protein 1 Nibrin Non-homologous end-joining factor 1 PAX-interacting protein 1 Protein artemis Serine-protein kinase ATM TP53-binding protein 1 Telomere-associated protein RIF1 Tyrosyl-DNA phosphodiesterase 1 Tyrosyl-DNA phosphodiesterase 2 Ubiquitin-conjugating enzyme E2 N Ubiquitin-conjugating enzyme E2 variant 2 X-ray repair cross-complementing protein 5 X-ray repair cross-complementing protein 6	A0A8I4SYN6 O70445 P10853 P10854 P23475 P27641 P27661 P46737 P48754 P61089 P62806 P70388 P70399 P70696 P97313 Q3KNJ2 Q3UI43 Q4U2R1 Q5PSV9 Q5U5Q9 Q61216 Q62388 Q64475 Q64478 Q64524 Q6NZQ4 Q6PR54 Q6ZWY9 Q80XJ2 Q8BJ37 Q8BPZ8 Q8BTF7 Q8BVE8 Q8CGP0 Q8CGP1 Q8CGP2 Q8CHK4 Q8K3W0 Q8K4J0 Q8VC56 Q924T3 Q9D2M8 Q9JIW4 Q9JJX7 Q9JM05 Q9QXE2 Q9R207	Abra1 Abraxas1 Art Atm Babam1 Babam2 Bard1 Blu Brca1 Brcc3 Brcc36 Bre C6.1a Ccdc98 Dclre1c Fam175a G22p1 G22p2 H2a.x H2afx H2ax H2b-f H2b-j H2b-l H2b-n H2bc1 H2bc11 H2bc12 H2bc13 H2bc14 H2bc15 H2bc21 H2bc26 H2bc26-ps H2bc3 H2bc4 H2bc6 H2bc7 H2bc8 H2bc9 H2bu1 H2bu1-ps H3f4 H4-12 H4-53 H4c1 H4c11 H4c12 H4c14 H4c16 H4c2 H4c3 H4c4 H4c6 H4c8 H4c9 H4f16 Herc2 Hist1h2ba Hist1h2bb Hist1h2bc Hist1h2be Hist1h2bf Hist1h2bg Hist1h2bh Hist1h2bj Hist1h2bk Hist1h2bl Hist1h2bm Hist1h2bn Hist1h2bp Hist1h4a Hist1h4b Hist1h4c Hist1h4d Hist1h4f Hist1h4h Hist1h4i Hist1h4j Hist1h4k Hist1h4m Hist2h2be Hist2h4 Hist2h4a Hist3h2bb Hist3h2bb-ps Hist4h4 Hist5-2ax Htatip Jdf2 Kat5 Kiaa0170 Kiaa0393 Kiaa1090 Ku70 Lig4 Mdc1 Merit40 Mms2 Mre11 Mre11a Nba1 Nbn Nbs1 Nhej1 Nsd2 Paxip1 Pias4 Piasg Polk Poll Polm Prkdc Ptip Rad50 Rap80 Rif1 Rip110 Rjs Rnf168 Rnf8 Rxrip110 Snm1l Tdp1 Tdp2 Th2b Tip60 Tp53bp1 Trp53bp1 Ttrap Ube2n Ube2v2 Uev2 Uimc1 Whsc1 Xlf Xrcc4 Xrcc5 Xrcc6 Xrcc7 polmu
Aspartate and asparagine metabolism	60 kDa lysophospholipase Acidic amino acid decarboxylase GADL1 Asparagine synthetase [glutamine-hydrolyzing] Aspartate aminotransferase, cytoplasmic Aspartate aminotransferase, mitochondrial Aspartoacylase Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial Glutamate carboxypeptidase 2 N-acetylaspartate synthetase N-acetylated-alpha-linked acidic dipeptidase 2	A0JNU3 O35409 P05201 P05202 Q3UGX3 Q61024 Q80WP8 Q8BH59 Q8R3P0 Q9CZR2 Q9QXX4	Asns Aspa Aspg Folh1 Gadl1 Got-2 Got1 Got2 Mopsm Naalad1 Naalad2 Nat8l Slc25a12 Slc25a13
Antimicrobial peptides	Anionic trypsin-2 BPI fold-containing family A member 1 BPI fold-containing family A member 2 BPI fold-containing family B member 1 BPI fold-containing family B member 2 BPI fold-containing family B member 4 BPI fold-containing family B member 6 Bactericidal permeability-increasing protein Cathelicidin antimicrobial peptide Cathepsin G Chromogranin-A Clusterin Eosinophil cationic protein 2 Eppin Intelectin-1a Lactotransferrin Liver-expressed antimicrobial peptide 2 Lysozyme C-2 Myeloblastin N-acetylmuramoyl-L-alanine amidase Neutrophil elastase Peptidoglycan recognition protein 1 Peptidoglycan recognition protein 3 Peptidoglycan recognition protein 4 Phospholipase A2, membrane associated Predicted gene, EG436523 Protease, serine, 1 (Trypsin 1) Reg III delta Regenerating islet-derived protein 3-alpha Regenerating islet-derived protein 3-beta Regenerating islet-derived protein 3-gamma Ribonuclease K6 Seminal vesicle secretory protein 3A Seminal vesicle secretory protein 3B Serine protease 3 like Serine protease 3 Trypsin-4 Trypsin-5 trypsin	A1A547 A2BGH0 F2Z472 O09037 O09049 O88310 O88593 P07146 P07743 P08071 P08905 P26339 P28293 P31482 P35230 P51437 P97361 P97425 Q06890 Q0VB07 Q3UP87 Q61096 Q61114 Q67E05 Q792Y8 Q792Y9 Q792Z0 Q792Z1 Q8BU51 Q8BZH8 Q8C1E1 Q8VCS0 Q91V13 Q9D244 Q9DA01 Q9QUK9 Q9QUS9 Q9R0T7 Q9Z1R9	Apoj Bpi Bpifa1 Bpifa2 Bpifb1 Bpifb2 Bpifb4 Bpifb6 Bpil1 Bpil3 Camp Chga Clu Cnlp Cramp Ctsg EG436523 Ear2 Ela2 Elane Eppin Gm1006 Gm10334 Gm119 Gm420 Gm5771 Intl Itln Itln1 Itln1a Itlna Leap2 Lplunc1 Lplunc4 Ltf Lyz Lyz2 Lyzs Msgp-2 Pap Pap1 Pap2 Pap3 Pglyrp Pglyrp1 Pglyrp2 Pglyrp3 Pglyrp4 Pglyrpl Pgrp Pgrpia Pgrpib Pgrpl Pgrps Pla2g2a Plunc Prss1 Prss1l Prss2 Prss3 Prss3l Prtn3 Psp Reg3a Reg3b Reg3d Reg3g Rnase2 Rnase6 Spinlw1 Splunc1 Svs3 Svs3a Svs3b T8 Tag7 Tc Tcrb-V20 Td Tesp4 Try10 Try2 Try4 Try5 Trygn16 trypsinogen	G49108TO
TBC/RABGAPs	ADP-ribosylation factor 6 Carabin Gamma-aminobutyric acid receptor-associated protein-like 2 Gamma-aminobutyric acid receptor-associated protein Hamartin Microtubule-associated proteins 1A/1B light chain 3B Optineurin Rab GTPase-activating protein 1 Ras-related protein Rab-11A Ras-related protein Rab-11B Ras-related protein Rab-33A Ras-related protein Rab-33B Ras-related protein Rab-35 Ras-related protein Rab-4A Ras-related protein Rab-6A Ras-related protein Rab-6B Ras-related protein Rab-7a Ras-related protein Rab-7b Ras-related protein Rab-8A Ras-related protein Rab-8B Serine/threonine-protein kinase ULK1 Synaptotagmin-like protein 1 TBC1 domain family member 10A TBC1 domain family member 10B TBC1 domain family member 13 TBC1 domain family member 14 TBC1 domain family member 15 TBC1 domain family member 17 TBC1 domain family member 24 TBC1 domain family member 25 TBC1 domain family member 2A TBC1 domain family member 7 TBC1 domain family, member 16 Tuberin	A1A5B6 A2ABG4 A2AWA9 B1AVH7 O35963 O70405 P35279 P46638 P51150 P55258 P56371 P58802 P60521 P61028 P61294 P62331 P62492 P97950 Q3UUG6 Q61037 Q6PHN9 Q8BHL3 Q8BYH7 Q8C9V1 Q8CGA2 Q8K3K8 Q8R3D1 Q8VEA8 Q99N80 Q9CQV6 Q9CXF4 Q9D0K0 Q9DCD6 Q9EP53	Arf6 D5Ertd110e D9Bwg0185e Epi64 Gabarap Gabarapl2 Kiaa0243 Kiaa1171 Kiaa1322 Kiaa4104 Map1alc3 Map1lc3 Map1lc3b Mel Optn Rab11 Rab11a Rab11b Rab33a Rab33b Rab35 Rab4 Rab4a Rab6 Rab6a Rab6b Rab7 Rab7a Rab7b Rab8 Rab8a Rab8b Rabgap1 Rabs10 Slp1 Sytl1 Tbc1d10 Tbc1d10a Tbc1d10b Tbc1d10c Tbc1d13 Tbc1d14 Tbc1d15 Tbc1d16 Tbc1d17 Tbc1d2 Tbc1d24 Tbc1d25 Tbc1d2a Tbc1d7 Tsc1 Tsc2 Ulk1
NRAGE signals death through JNK	A-kinase anchor protein 13 Active breakpoint cluster region-related protein Bcl-2-like protein 11 Bcl2-associated agonist of cell death Ephexin-1 FYVE, RhoGEF and PH domain-containing protein 1 FYVE, RhoGEF and PH domain-containing protein 2 FYVE, RhoGEF and PH domain-containing protein 3 FYVE, RhoGEF and PH domain-containing protein 4 Guanine nucleotide exchange factor DBS Guanine nucleotide exchange factor VAV2 Guanine nucleotide exchange factor VAV3 Guanine nucleotide-binding protein subunit alpha-13 Intersectin-1 Kalirin Mcf.2 transforming sequence Mitogen-activated protein kinase 8 Neuroepithelial cell-transforming gene 1 protein Obscurin Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein Pleckstrin homology domain-containing family G member 2 Pleckstrin homology domain-containing family G member 5 Protein ECT2 Proto-oncogene vav Ras-related C3 botulinum toxin substrate 1 Ras-specific guanine nucleotide-releasing factor 2 Rho guanine nucleotide exchange factor (GEF) 11 Rho guanine nucleotide exchange factor 10-like protein Rho guanine nucleotide exchange factor 10 Rho guanine nucleotide exchange factor 12 Rho guanine nucleotide exchange factor 15 Rho guanine nucleotide exchange factor 16 Rho guanine nucleotide exchange factor 17 Rho guanine nucleotide exchange factor 18 Rho guanine nucleotide exchange factor 19 Rho guanine nucleotide exchange factor 1 Rho guanine nucleotide exchange factor 25 Rho guanine nucleotide exchange factor 26 Rho guanine nucleotide exchange factor 2 Rho guanine nucleotide exchange factor 33 Rho guanine nucleotide exchange factor 37 Rho guanine nucleotide exchange factor 38 Rho guanine nucleotide exchange factor 39 Rho guanine nucleotide exchange factor 3 Rho guanine nucleotide exchange factor 5 Rho guanine nucleotide exchange factor 6 Rho guanine nucleotide exchange factor 7 Rho guanine nucleotide exchange factor 9 Rho guanine nucleotide exchange factor TIAM1 Rho guanine nucleotide exchange factor TIAM2 Son of sevenless homolog 1 Son of sevenless homolog 2 Triple functional domain protein	A1IGU4 A2AAJ9 A2AWP8 A2CG49 D3YYY8 E9Q394 E9Q7D5 O54918 O88842 P27601 P27870 P52734 P63001 P70392 Q02384 Q07139 Q0KL02 Q3U5C8 Q3UTH8 Q5FWH6 Q5SSL4 Q60610 Q60875 Q60992 Q61210 Q61337 Q62245 Q64096 Q66JY6 Q66T02 Q68FM7 Q69ZK0 Q6KAU7 Q6P9R4 Q6ZPF3 Q80U35 Q80VK6 Q8BLE2 Q8BW86 Q8BWA8 Q8BY35 Q8C033 Q8CHT1 Q8K4I3 Q8R4H2 Q91X46 Q91Y86 Q91ZT5 Q9CWR0 Q9ES28 Q9R0C8 Q9Z0R4 Q9Z206	Abr Akap13 Arhgef1 Arhgef10 Arhgef10l Arhgef11 Arhgef12 Arhgef15 Arhgef16 Arhgef17 Arhgef18 Arhgef19 Arhgef2 Arhgef25 Arhgef26 Arhgef3 Arhgef33 Arhgef37 Arhgef38 Arhgef39 Arhgef5 Arhgef6 Arhgef7 Arhgef8 Arhgef9 Bad Bbc6 Bcl2l11 Bim Brx D10Ertd610e Dbs Ect2 Ese1 Fgd1 Fgd2 Fgd3 Fgd4 Geft Gm878 Gm941 Gna-13 Gna13 Grf2 Itsn Itsn1 Jnk1 Kalrn Kiaa0142 Kiaa0294 Kiaa0337 Kiaa0382 Kiaa0424 Kiaa0521 Kiaa0651 Kiaa0720 Kiaa0915 Kiaa1415 Kiaa1626 Kiaa2016 Larg Lbcl1 Lbcl2 Lfc Lsc Mapk8 Mcf2 Mcf2l Net1 Ngef Obscn Pak3bp Plekhg2 Plekhg5 Prex1 Prkm8 Rac1 Rasgrf2 Sos1 Sos2 Stef Syx Tiam-1 Tiam1 Tiam2 Trio Vav Vav1 Vav2 Vav3 Wgef mKIAA4037
G alpha (12/13) signalling events	A-kinase anchor protein 13 Active breakpoint cluster region-related protein Alpha-1A adrenergic receptor Alpha-1B adrenergic receptor Alpha-1D adrenergic receptor Ephexin-1 FYVE, RhoGEF and PH domain-containing protein 1 FYVE, RhoGEF and PH domain-containing protein 2 FYVE, RhoGEF and PH domain-containing protein 3 FYVE, RhoGEF and PH domain-containing protein 4 Guanine nucleotide exchange factor DBS Guanine nucleotide exchange factor VAV2 Guanine nucleotide exchange factor VAV3 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-8 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 Guanine nucleotide-binding protein G(T) subunit gamma-T1 Guanine nucleotide-binding protein subunit alpha-12 Guanine nucleotide-binding protein subunit alpha-13 Guanine nucleotide-binding protein subunit beta-4 Guanine nucleotide-binding protein subunit beta-5 Intersectin-1 Kalirin Mcf.2 transforming sequence Neuroepithelial cell-transforming gene 1 protein Obscurin Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein Pleckstrin homology domain-containing family G member 2 Pleckstrin homology domain-containing family G member 5 Plexin-B1 Protein ECT2 Proto-oncogene vav Ras-specific guanine nucleotide-releasing factor 2 Rho guanine nucleotide exchange factor (GEF) 11 Rho guanine nucleotide exchange factor 10-like protein Rho guanine nucleotide exchange factor 10 Rho guanine nucleotide exchange factor 12 Rho guanine nucleotide exchange factor 15 Rho guanine nucleotide exchange factor 16 Rho guanine nucleotide exchange factor 17 Rho guanine nucleotide exchange factor 18 Rho guanine nucleotide exchange factor 19 Rho guanine nucleotide exchange factor 1 Rho guanine nucleotide exchange factor 25 Rho guanine nucleotide exchange factor 26 Rho guanine nucleotide exchange factor 2 Rho guanine nucleotide exchange factor 33 Rho guanine nucleotide exchange factor 37 Rho guanine nucleotide exchange factor 38 Rho guanine nucleotide exchange factor 39 Rho guanine nucleotide exchange factor 3 Rho guanine nucleotide exchange factor 5 Rho guanine nucleotide exchange factor 6 Rho guanine nucleotide exchange factor 7 Rho guanine nucleotide exchange factor 9 Rho guanine nucleotide exchange factor TIAM1 Rho guanine nucleotide exchange factor TIAM2 Rho-associated protein kinase 1 Rho-associated protein kinase 2 Rho-related GTP-binding protein RhoB Rho-related GTP-binding protein RhoC Son of sevenless homolog 1 Son of sevenless homolog 2 Thromboxane A2 receptor Transforming protein RhoA Triple functional domain protein Tyrosine-protein kinase BTK	A1IGU4 A2AAJ9 A2AWP8 A2CG49 D3YYY8 E9Q394 E9Q7D5 O88842 P27600 P27601 P27870 P29387 P30987 P35991 P50153 P52734 P61953 P62746 P62874 P62880 P62881 P63078 P63213 P63216 P70335 P70336 P70392 P97714 P97717 P97718 Q02384 Q07139 Q0KL02 Q3U5C8 Q3UTH8 Q5FWH6 Q5SSL4 Q60610 Q60875 Q60992 Q61011 Q61012 Q61016 Q61017 Q61210 Q62159 Q62245 Q64096 Q66JY6 Q66T02 Q68FM7 Q69ZK0 Q6KAU7 Q6P9R4 Q6ZPF3 Q80SZ7 Q80U35 Q80VK6 Q8BLE2 Q8BW86 Q8BWA8 Q8BY35 Q8C033 Q8CHT1 Q8CJH3 Q8K4I3 Q8R4H2 Q91X46 Q91ZT5 Q9CWR0 Q9CXP8 Q9DAS9 Q9ES28 Q9JMF3 Q9QUI0 Q9R0C8 Q9Z0R4 Q9Z206	Abr Adra1a Adra1b Adra1c Adra1d Akap13 Arha Arha2 Arhb Arhc Arhgef1 Arhgef10 Arhgef10l Arhgef11 Arhgef12 Arhgef15 Arhgef16 Arhgef17 Arhgef18 Arhgef19 Arhgef2 Arhgef25 Arhgef26 Arhgef3 Arhgef33 Arhgef37 Arhgef38 Arhgef39 Arhgef5 Arhgef6 Arhgef7 Arhgef8 Arhgef9 Bpk Brx Btk D10Ertd610e Dbs Ect2 Ese1 Fgd1 Fgd2 Fgd3 Fgd4 Geft Gm878 Gm941 Gna-12 Gna-13 Gna12 Gna13 Gnb1 Gnb2 Gnb3 Gnb4 Gnb5 Gng1 Gng10 Gng11 Gng12 Gng13 Gng2 Gng3 Gng4 Gng5 Gng7 Gng8 Gng9 Gngt1 Gngt11 Gngt2 Gngt3 Gngt4 Gngt5 Gngt7 Gngt8 Gngt9 Gpcr8 Grf2 Itsn Itsn1 Kalrn Kiaa0142 Kiaa0294 Kiaa0337 Kiaa0382 Kiaa0407 Kiaa0424 Kiaa0521 Kiaa0651 Kiaa0720 Kiaa0915 Kiaa1415 Kiaa1626 Kiaa2016 Larg Lbcl1 Lbcl2 Lfc Lsc Mcf2 Mcf2l Net1 Ngef Obscn Pak3bp Plekhg2 Plekhg5 Plxnb1 Prex1 Rasgrf2 Rhoa Rhob Rhoc Rock1 Rock2 Sos1 Sos2 Stef Syx Tbxa2r Tiam-1 Tiam1 Tiam2 Trio Vav Vav1 Vav2 Vav3 Wgef mKIAA4037
Sodium/Proton exchangers	Sodium/hydrogen exchanger 1 Sodium/hydrogen exchanger 2 Sodium/hydrogen exchanger 3 Sodium/hydrogen exchanger 4 Sodium/hydrogen exchanger 5 Sodium/hydrogen exchanger 6 Sodium/hydrogen exchanger 7 Sodium/hydrogen exchanger 8 Sodium/hydrogen exchanger 9	A1L3P4 B2RXE2 G3X939 Q3ZAS0 Q61165 Q8BLV3 Q8BUE1 Q8BZ00 Q8R4D1	Nhe1 Nhe2 Nhe4 Nhe5 Nhe6 Nhe7 Nhe8 Nhe9 Slc9a1 Slc9a2 Slc9a3 Slc9a4 Slc9a5 Slc9a6 Slc9a7 Slc9a8 Slc9a9
DNA Damage Recognition in GG-NER	Actin, cytoplasmic 1 Actin-like protein 6A Actin-related protein 5 Actin-related protein 8 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 3 COP9 signalosome complex subunit 4 COP9 signalosome complex subunit 5 COP9 signalosome complex subunit 6 COP9 signalosome complex subunit 7a COP9 signalosome complex subunit 7b COP9 signalosome complex subunit 8 Centrin-2 Chromatin-remodeling ATPase INO80 Cullin-4A Cullin-4B DNA damage-binding protein 1 DNA damage-binding protein 2 DNA repair protein complementing XP-C cells homolog E3 ubiquitin-protein ligase RBX1 INO80 complex subunit B INO80 complex subunit C INO80 complex subunit D INO80 complex subunit E Microspherule protein 1 Nuclear factor related to kappa-B-binding protein Poly [ADP-ribose] polymerase 1 Poly [ADP-ribose] polymerase 2 Polyubiquitin-B Polyubiquitin-C RuvB-like 1 TCF3 fusion partner homolog Transcriptional repressor protein YY1 UV excision repair protein RAD23 homolog A UV excision repair protein RAD23 homolog B Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	A2A432 D3Z3H0 O35864 O88543 O88544 O88545 O88554 P0CG49 P0CG50 P11103 P51612 P54726 P54728 P60122 P60710 P61202 P62878 P62983 P62984 Q00899 Q3TCH7 Q3U1J1 Q3U1J4 Q66JY2 Q6PIJ4 Q6ZPV2 Q80US4 Q8BHA0 Q8BV13 Q8R2S9 Q8VBV7 Q99J79 Q99L90 Q99LD4 Q99PT3 Q9CZ04 Q9R1K9 Q9Z2N8	Actb Actl6 Actl6a Actr5 Actr8 Adprp Adprt Adprt1 Adprt2 Adprtl2 Amida Arp8 Aspartl2 Baf53a Calt Cetn2 Cops1 Cops2 Cops3 Cops4 Cops5 Cops6 Cops7a Cops7b Cops8 Csn1 Csn2 Csn3 Csn4 Csn5 Csn6 Csn7a Csn7b Csn8 Cul4a Cul4b Ddb1 Ddb2 Gps1 Hmga1l4 Ino80 Ino80b Ino80c Ino80d Ino80e Inoc1 Jab1 Kiaa0695 Kiaa1259 Kic2 Mcrs1 Mhr23a Mhr23b Msp58 Nfrkb Papa1 Parp1 Parp2 Rad23a Rad23b Rbx1 Rps27a Ruvbl1 Tfpt Tip49 Tip49a Trip15 Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2 Ucrbp Xpc Yy1 Znhit4
Dual incision in TC-NER	CDK-activating kinase assembly factor MAT1 Cullin-4A Cullin-4B Cyclin-H Cyclin-dependent kinase 7 DNA damage-binding protein 1 DNA excision repair protein ERCC-1 DNA excision repair protein ERCC-5 DNA excision repair protein ERCC-6 DNA excision repair protein ERCC-8 DNA polymerase delta catalytic subunit DNA polymerase delta subunit 2 DNA polymerase delta subunit 3 DNA polymerase delta subunit 4 DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon subunit 2 DNA polymerase epsilon subunit 3 DNA polymerase epsilon subunit 4 DNA polymerase kappa DNA repair endonuclease XPF DNA repair protein complementing XP-A cells homolog DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 E3 ubiquitin-protein ligase RBX1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Polyubiquitin-B Polyubiquitin-C Pre-mRNA-processing factor 19 Pre-mRNA-splicing factor ISY1 homolog Pre-mRNA-splicing factor SYF1 Proliferating cell nuclear antigen RNA helicase aquarius Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit Transcription elongation factor A protein 1 UV-stimulated scaffold protein A Ubiquitin carboxyl-terminal hydrolase 7 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Zinc finger protein 830	A2A432 F8VPZ5 O08740 O08811 O35654 O54956 O70422 P07903 P08775 P0CG49 P0CG50 P10711 P17918 P35601 P35689 P49135 P51949 P52431 P60898 P61219 P62488 P62876 P62878 P62983 P62984 P97760 Q03147 Q3TCH7 Q3U1J4 Q61458 Q62193 Q63871 Q64267 Q69ZQ2 Q6A4J8 Q80UW8 Q8CFD5 Q8CFI7 Q8CFQ3 Q8K2X8 Q8R1N0 Q8R323 Q8VD76 Q8VEE4 Q923G2 Q99J62 Q99KP6 Q9CQ36 Q9CQ71 Q9CWP8 Q9D0F6 Q9D479 Q9D7M8 Q9DBA9 Q9DCD2 Q9EQ28 Q9JIB4 Q9JKP7 Q9QUG2 Q9QZD4 Q9WUK4 Q9WVF7	Aqr Btf2p44 Cak Ccdc16 Ccnh Cdk7 Cdkn7 Ckn1 Crk4 Csa Csb Cul4a Cul4b D17Wsu155e Ddb1 Dinb1 Ercc-1 Ercc-5 Ercc1 Ercc2 Ercc3 Ercc4 Ercc5 Ercc6 Ercc8 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Hausp Ibf-1 Isy1 Kiaa0560 Kiaa0695 Kiaa1160 Kiaa1530 Mat1 Mnat1 Mo15 Mpk-7 Mt1a Omcg1 Pcna Pold1 Pold2 Pold3 Pold4 Pole Pole1 Pole2 Pole3 Pole4 Polk Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Prp19 Prpf19 Rbx1 Recc1 Rfc1 Rfc2 Rfc3 Rfc4 Rfc5 Rpa1 Rpa2 Rpa3 Rpa34 Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Rps27a Snev Syf1 Tcea1 Tceat Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2 Usp7 Uvssa Xab2 Xpa Xpac Xpb Xpbc Xpd Xpf Xpg Zfp830 Znf830
Gap-filling DNA repair synthesis and ligation in TC-NER	CDK-activating kinase assembly factor MAT1 Cullin-4A Cullin-4B Cyclin-H Cyclin-dependent kinase 7 DNA damage-binding protein 1 DNA excision repair protein ERCC-6 DNA excision repair protein ERCC-8 DNA ligase 1 DNA ligase 3 DNA polymerase delta catalytic subunit DNA polymerase delta subunit 2 DNA polymerase delta subunit 3 DNA polymerase delta subunit 4 DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon subunit 2 DNA polymerase epsilon subunit 3 DNA polymerase epsilon subunit 4 DNA polymerase kappa DNA repair protein XRCC1 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 E3 ubiquitin-protein ligase RBX1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Polyubiquitin-B Polyubiquitin-C Pre-mRNA-processing factor 19 Pre-mRNA-splicing factor ISY1 homolog Pre-mRNA-splicing factor SYF1 Proliferating cell nuclear antigen RNA helicase aquarius Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit Transcription elongation factor A protein 1 UV-stimulated scaffold protein A Ubiquitin carboxyl-terminal hydrolase 7 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Zinc finger protein 830	A2A432 F8VPZ5 O08740 O08811 O35654 O54956 O70422 P08775 P0CG49 P0CG50 P10711 P17918 P35601 P37913 P49135 P51949 P52431 P60898 P61219 P62488 P62876 P62878 P62983 P62984 P97386 P97760 Q03147 Q3TCH7 Q3U1J4 Q60596 Q61458 Q62193 Q63871 Q69ZQ2 Q6A4J8 Q80UW8 Q8CFD5 Q8CFI7 Q8CFQ3 Q8K2X8 Q8R1N0 Q8R323 Q8VD76 Q8VEE4 Q923G2 Q99J62 Q99KP6 Q9CQ36 Q9CQ71 Q9CWP8 Q9D0F6 Q9D479 Q9D7M8 Q9DBA9 Q9DCD2 Q9EQ28 Q9JIB4 Q9JKP7 Q9QUG2 Q9WUK4 Q9WVF7	Aqr Btf2p44 Cak Ccdc16 Ccnh Cdk7 Cdkn7 Ckn1 Crk4 Csa Csb Cul4a Cul4b D17Wsu155e Ddb1 Dinb1 Ercc2 Ercc3 Ercc6 Ercc8 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Hausp Ibf-1 Isy1 Kiaa0560 Kiaa0695 Kiaa1160 Kiaa1530 Lig-1 Lig1 Lig3 Mat1 Mnat1 Mo15 Mpk-7 Mt1a Omcg1 Pcna Pold1 Pold2 Pold3 Pold4 Pole Pole1 Pole2 Pole3 Pole4 Polk Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Prp19 Prpf19 Rbx1 Recc1 Rfc1 Rfc2 Rfc3 Rfc4 Rfc5 Rpa1 Rpa2 Rpa3 Rpa34 Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Rps27a Snev Syf1 Tcea1 Tceat Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2 Usp7 Uvssa Xab2 Xpb Xpbc Xpd Xrcc-1 Xrcc1 Zfp830 Znf830
Formation of TC-NER Pre-Incision Complex	CDK-activating kinase assembly factor MAT1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 3 COP9 signalosome complex subunit 4 COP9 signalosome complex subunit 5 COP9 signalosome complex subunit 6 COP9 signalosome complex subunit 7a COP9 signalosome complex subunit 7b COP9 signalosome complex subunit 8 Cullin-4A Cullin-4B Cyclin-H Cyclin-dependent kinase 7 DNA damage-binding protein 1 DNA excision repair protein ERCC-6 DNA excision repair protein ERCC-8 DNA repair protein complementing XP-A cells homolog DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 E3 ubiquitin-protein ligase RBX1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Polyubiquitin-B Polyubiquitin-C Pre-mRNA-processing factor 19 Pre-mRNA-splicing factor ISY1 homolog Pre-mRNA-splicing factor SYF1 RNA helicase aquarius Transcription elongation factor A protein 1 UV-stimulated scaffold protein A Ubiquitin carboxyl-terminal hydrolase 7 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Zinc finger protein 830	A2A432 F8VPZ5 O08740 O08811 O35864 O70422 O88543 O88544 O88545 P08775 P0CG49 P0CG50 P10711 P49135 P51949 P60898 P61202 P61219 P62488 P62876 P62878 P62983 P62984 P97760 Q03147 Q3TCH7 Q3U1J4 Q61458 Q63871 Q64267 Q69ZQ2 Q6A4J8 Q80UW8 Q8BV13 Q8CFD5 Q8CFI7 Q8CFQ3 Q8K2X8 Q8R1N0 Q8VBV7 Q8VD76 Q923G2 Q99KP6 Q99LD4 Q9CZ04 Q9D479 Q9D7M8 Q9DBA9 Q9DCD2 Q9JIB4	Aqr Btf2p44 Cak Ccdc16 Ccnh Cdk7 Cdkn7 Ckn1 Cops1 Cops2 Cops3 Cops4 Cops5 Cops6 Cops7a Cops7b Cops8 Crk4 Csa Csb Csn1 Csn2 Csn3 Csn4 Csn5 Csn6 Csn7a Csn7b Csn8 Cul4a Cul4b D17Wsu155e Ddb1 Ercc2 Ercc3 Ercc6 Ercc8 Gps1 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Hausp Isy1 Jab1 Kiaa0560 Kiaa0695 Kiaa1160 Kiaa1530 Kic2 Mat1 Mnat1 Mo15 Mpk-7 Mt1a Omcg1 Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Prp19 Prpf19 Rbx1 Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Rps27a Snev Syf1 Tcea1 Tceat Trip15 Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2 Usp7 Uvssa Xab2 Xpa Xpac Xpb Xpbc Xpd Zfp830 Znf830
Dual Incision in GG-NER	Chromodomain-helicase-DNA-binding protein 1-like Cullin-4A Cullin-4B DNA damage-binding protein 1 DNA damage-binding protein 2 DNA excision repair protein ERCC-1 DNA excision repair protein ERCC-5 DNA polymerase delta catalytic subunit DNA polymerase delta subunit 2 DNA polymerase delta subunit 3 DNA polymerase delta subunit 4 DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon subunit 2 DNA polymerase epsilon subunit 3 DNA polymerase epsilon subunit 4 DNA polymerase kappa DNA repair endonuclease XPF DNA repair protein complementing XP-A cells homolog E3 ubiquitin-protein ligase RBX1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Poly [ADP-ribose] polymerase 1 Poly [ADP-ribose] polymerase 2 Polyubiquitin-B Polyubiquitin-C Proliferating cell nuclear antigen Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	A2A432 O08811 O35654 O54956 O70422 O88554 P07903 P0CG49 P0CG50 P11103 P17918 P35601 P35689 P49135 P52431 P62878 P62983 P62984 Q3TCH7 Q3U1J4 Q62193 Q64267 Q8K2X8 Q8R323 Q8VD76 Q8VEE4 Q99J62 Q99J79 Q9CQ36 Q9CQ71 Q9CWP8 Q9CXF7 Q9D0F6 Q9DBA9 Q9EQ28 Q9JIB4 Q9JKP7 Q9QUG2 Q9QZD4 Q9WUK4 Q9WVF7	Adprp Adprt Adprt1 Adprt2 Adprtl2 Aspartl2 Btf2p44 Chd1l Cul4a Cul4b D17Wsu155e Ddb1 Ddb2 Dinb1 Ercc-1 Ercc-5 Ercc1 Ercc2 Ercc3 Ercc4 Ercc5 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Ibf-1 Kiaa0695 Parp1 Parp2 Pcna Pold1 Pold2 Pold3 Pold4 Pole Pole1 Pole2 Pole3 Pole4 Polk Rbx1 Recc1 Rfc1 Rfc2 Rfc3 Rfc4 Rfc5 Rpa1 Rpa2 Rpa3 Rpa34 Rps27a Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2 Xpa Xpac Xpb Xpbc Xpd Xpf Xpg
Formation of Incision Complex in GG-NER	CDK-activating kinase assembly factor MAT1 Centrin-2 Chromodomain-helicase-DNA-binding protein 1-like Cullin-4A Cullin-4B Cyclin-H Cyclin-dependent kinase 7 DNA damage-binding protein 1 DNA damage-binding protein 2 DNA excision repair protein ERCC-1 DNA excision repair protein ERCC-5 DNA repair endonuclease XPF DNA repair protein complementing XP-A cells homolog DNA repair protein complementing XP-C cells homolog E3 SUMO-protein ligase PIAS1 E3 SUMO-protein ligase PIAS3 E3 ubiquitin-protein ligase Arkadia E3 ubiquitin-protein ligase RBX1 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Poly [ADP-ribose] polymerase 1 Poly [ADP-ribose] polymerase 2 Polyubiquitin-B Polyubiquitin-C Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit SUMO-conjugating enzyme UBC9 Small ubiquitin-related modifier 1 Small ubiquitin-related modifier 2 Small ubiquitin-related modifier 3 UV excision repair protein RAD23 homolog A UV excision repair protein RAD23 homolog B Ubiquitin carboxyl-terminal hydrolase 45 Ubiquitin-conjugating enzyme E2 N Ubiquitin-conjugating enzyme E2 variant 2 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	A2A432 O08811 O54714 O70422 O88554 O88907 P07903 P0CG49 P0CG50 P11103 P35689 P49135 P51612 P51949 P54726 P54728 P61089 P61957 P62878 P62983 P62984 P63166 P63280 Q03147 Q3TCH7 Q3U1J4 Q61458 Q62193 Q64267 Q8K2X8 Q8K387 Q8VD76 Q8VEE4 Q99J79 Q99ML9 Q9CQ71 Q9CXF7 Q9D2M8 Q9DBA9 Q9JIB4 Q9QZD4 Q9R1K9 Q9Z172	Adprp Adprt Adprt1 Adprt2 Adprtl2 Aspartl2 Blu Btf2p44 Cak Calt Ccnh Cdk7 Cdkn7 Cetn2 Chd1l Crk4 Cul4a Cul4b D17Wsu155e Ddb1 Ddb2 Ddxbp1 Ercc-1 Ercc-5 Ercc1 Ercc2 Ercc3 Ercc4 Ercc5 Gtf2h1 Gtf2h2 Gtf2h3 Gtf2h4 Gtf2h5 Kiaa0695 Mat1 Mhr23a Mhr23b Mms2 Mnat1 Mo15 Mpk-7 Parp1 Parp2 Pias1 Pias3 Rad23a Rad23b Rbx1 Rnf111 Rpa1 Rpa2 Rpa3 Rpa34 Rps27a Smt3a Smt3b Smt3c Smt3h1 Smt3h2 Smt3h3 Sumo1 Sumo2 Sumo3 Uba52 Uba80 Ubb Ubc Ubc9 Ubce2i Ubce9 Ubcep1 Ubcep2 Ube2i Ube2n Ube2v2 Ubl1 Uev2 Usp45 Xpa Xpac Xpb Xpbc Xpc Xpd Xpf Xpg
Recognition of DNA damage by PCNA-containing replication complex	Cullin-4A Cullin-4B DNA damage-binding protein 1 DNA polymerase delta catalytic subunit DNA polymerase delta subunit 2 DNA polymerase delta subunit 3 DNA polymerase delta subunit 4 DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon subunit 2 DNA polymerase epsilon subunit 3 DNA polymerase epsilon subunit 4 Denticleless protein homolog E3 ubiquitin-protein ligase RAD18 E3 ubiquitin-protein ligase RBX1 Polyubiquitin-B Polyubiquitin-C Proliferating cell nuclear antigen Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication factor C subunit 4 Replication factor C subunit 5 Replication protein A 14 kDa subunit Replication protein A 32 kDa subunit Replication protein A 70 kDa DNA-binding subunit Ubiquitin carboxyl-terminal hydrolase 1 Ubiquitin-conjugating enzyme E2 B Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein WD repeat-containing protein 48	A2A432 O35654 O54956 P0CG49 P0CG50 P17918 P35601 P52431 P62878 P62983 P62984 P63147 Q3TCH7 Q3TLR7 Q3U1J4 Q62193 Q8BH57 Q8BJQ2 Q8R323 Q8VEE4 Q99J62 Q9CQ36 Q9CQ71 Q9CWP8 Q9D0F6 Q9EQ28 Q9JKP7 Q9QXK2 Q9WUK4 Q9WVF7	Cdt2 Cul4a Cul4b Ddb1 Dtl Ibf-1 Kiaa0695 Kiaa1449 L2dtl Pcna Pold1 Pold2 Pold3 Pold4 Pole Pole1 Pole2 Pole3 Pole4 Rad18 Rad18sc Rad6b Ramp Rbx1 Recc1 Rfc1 Rfc2 Rfc3 Rfc4 Rfc5 Rpa1 Rpa2 Rpa3 Rpa34 Rps27a Uaf1 Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2 Ube2b Usp1 Wdr48
pre-mRNA splicing	116 kDa U5 small nuclear ribonucleoprotein component 17S U2 SnRNP complex component HTATSF1 ATP-dependent RNA helicase A ATP-dependent RNA helicase DDX42 ATP-dependent RNA helicase DHX15 ATP-dependent RNA helicase DHX8 Apoptotic chromatin condensation inducer in the nucleus BUD13 homolog Beta-catenin-like protein 1 Calcium homeostasis endoplasmic reticulum protein Cell division cycle 5-like protein Coiled-coil domain-containing protein 12 Crooked neck-like protein 1 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Eukaryotic initiation factor 4A-III Exosome RNA helicase MTR4 G patch domain-containing protein 1 G-patch domain and KOW motifs-containing protein General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 Heat shock cognate 71 kDa protein Heterogeneous nuclear ribonucleoprotein A1 Heterogeneous nuclear ribonucleoprotein A3 Heterogeneous nuclear ribonucleoprotein D0 Heterogeneous nuclear ribonucleoprotein F Heterogeneous nuclear ribonucleoprotein H2 Heterogeneous nuclear ribonucleoprotein H Heterogeneous nuclear ribonucleoprotein K Heterogeneous nuclear ribonucleoprotein L Heterogeneous nuclear ribonucleoprotein R Heterogeneous nuclear ribonucleoprotein U Heterogeneous nuclear ribonucleoproteins A2/B1 Heterogeneous nuclear ribonucleoproteins C1/C2 Histone deacetylase complex subunit SAP18 Leukocyte receptor cluster member 1 homolog Luc7-like protein 3 Microfibrillar-associated protein 1A Microfibrillar-associated protein 1B NF-kappa-B-activating protein NHP2-like protein 1 Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 Nuclear speckle splicing regulatory protein 1 PHD finger-like domain-containing protein 5A PRKR-interacting protein 1 Papillary Renal Cell carcinoma (Translocation-associated) Peptidyl-prolyl cis-trans isomerase H Peptidyl-prolyl cis-trans isomerase-like 1 Peptidyl-prolyl cis-trans isomerase-like 3 Peptidyl-prolyl cis-trans isomerase-like 4 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 Pinin Pleiotropic regulator 1 Poly(U)-binding-splicing factor PUF60 Poly(rC)-binding protein 1 Poly(rC)-binding protein 2 Polyglutamine-binding protein 1 Polypyrimidine tract-binding protein 1 Pre-mRNA-processing factor 17 Pre-mRNA-processing factor 19 Pre-mRNA-processing factor 40 homolog A Pre-mRNA-processing factor 6 Pre-mRNA-processing-splicing factor 8 Pre-mRNA-splicing factor 18 Pre-mRNA-splicing factor 38A Pre-mRNA-splicing factor CWC22 homolog Pre-mRNA-splicing factor CWC25 homolog Pre-mRNA-splicing factor ISY1 homolog Pre-mRNA-splicing factor RBM22 Pre-mRNA-splicing factor SLU7 Pre-mRNA-splicing factor SPF27 Pre-mRNA-splicing factor SYF1 Pre-mRNA-splicing factor SYF2 Probable ATP-dependent RNA helicase DDX41 Probable ATP-dependent RNA helicase DDX46 Probable ATP-dependent RNA helicase DDX5 Protein BUD31 homolog Protein CASC3 Protein FAM32A Protein FAM50A Protein Red Protein mago nashi homolog RIKEN cDNA 4930595M18 gene RING-type E3 ubiquitin-protein ligase PPIL2 RNA helicase aquarius RNA helicase RNA helicase RNA helicase RNA helicase RNA-binding motif protein, X chromosome RNA-binding motif protein, X-linked 2 RNA-binding protein 10 RNA-binding protein 25 RNA-binding protein 39 RNA-binding protein 42 RNA-binding protein 5 RNA-binding protein 7 RNA-binding protein 8A RNA-binding protein FUS RNA-binding protein with serine-rich domain 1 Ring finger protein 113A1 SNW domain-containing protein 1 STING ER exit protein SURP and G-patch domain-containing protein 1 Serine and arginine-rich splicing factor 11 Serine/arginine repetitive matrix protein 1 Serine/arginine repetitive matrix protein 2 Serine/arginine-rich splicing factor 10 Serine/arginine-rich splicing factor 1 Serine/arginine-rich splicing factor 2 Serine/arginine-rich splicing factor 3 Serine/arginine-rich splicing factor 5 Serine/arginine-rich splicing factor 7 Serine/arginine-rich splicing factor 9 Serine/threonine-protein kinase PRP4 homolog Serrate RNA effector molecule homolog Smad nuclear-interacting protein 1 Small nuclear ribonucleoprotein E Small nuclear ribonucleoprotein F Small nuclear ribonucleoprotein G Small nuclear ribonucleoprotein Sm D1 Small nuclear ribonucleoprotein Sm D2 Small nuclear ribonucleoprotein Sm D3 Small nuclear ribonucleoprotein-associated protein B Small nuclear ribonucleoprotein-associated protein N Spliceosome RNA helicase Ddx39b Spliceosome-associated protein CWC15 homolog Spliceosome-associated protein CWC27 homolog Splicing factor 1 Splicing factor 3A subunit 1 Splicing factor 3A subunit 2 Splicing factor 3A subunit 3 Splicing factor 3B subunit 1 Splicing factor 3B subunit 2 Splicing factor 3B subunit 3 Splicing factor 3B subunit 4 Splicing factor 3B subunit 5 Splicing factor 45 Splicing factor C9orf78 homolog Splicing factor Cactin Splicing factor U2AF 26 kDa subunit Splicing factor U2AF 35 kDa subunit Splicing factor U2AF 65 kDa subunit Splicing factor YJU2 Splicing regulator SDE2 Survival of motor neuron-related-splicing factor 30 THO complex subunit 4 Thioredoxin-like protein 4A Transcription elongation regulator 1 Transformer-2 protein homolog beta U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein C U2 small nuclear ribonucleoprotein A' U2 small nuclear ribonucleoprotein B'' U2 snRNP-associated SURP motif-containing protein U4/U6 small nuclear ribonucleoprotein Prp31 U4/U6 small nuclear ribonucleoprotein Prp3 U4/U6 small nuclear ribonucleoprotein Prp4 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein U4/U6.U5 tri-snRNP-associated protein 1 U5 small nuclear ribonucleoprotein 200 kDa helicase U5 small nuclear ribonucleoprotein 40 kDa protein U6 snRNA-associated Sm-like protein LSm2 U6 snRNA-associated Sm-like protein LSm3 U6 snRNA-associated Sm-like protein LSm4 U6 snRNA-associated Sm-like protein LSm5 U6 snRNA-associated Sm-like protein LSm6 U6 snRNA-associated Sm-like protein LSm7 U6 snRNA-associated Sm-like protein LSm8 UPF3 regulator of nonsense transcripts homolog B (yeast) Ubiquitin carboxyl-terminal hydrolase 39 Ubiquitin-like protein 5 WD repeat-containing protein 70 WD40 repeat-containing protein SMU1 WW domain-binding protein 11 WW domain-binding protein 4 Y-box-binding protein 1 Zinc finger matrin-type protein 2 Zinc finger protein 830	A2A4P0 A2ACQ1 A2RRY9 B2RY56 C0HKD8 C0HKD9 D3Z0M9 E9Q6E5 G3X8X0 O08583 O08740 O08810 O35286 O35326 O35691 O35737 O35900 O55128 O70133 O88569 P08775 P17225 P26369 P27048 P49312 P56959 P57784 P60335 P60898 P61219 P61327 P61979 P62305 P62307 P62309 P62311 P62313 P62315 P62317 P62320 P62322 P62488 P62876 P62960 P62996 P63017 P63154 P63163 P70333 P83870 P83877 P84104 P97760 Q3THK3 Q3TIX9 Q3TKY6 Q3TQI7 Q3TWF6 Q3UEB3 Q3UJB0 Q3UKJ7 Q3ULL6 Q3UYV9 Q4FK66 Q52KI8 Q569Z5 Q56A08 Q5NCR9 Q5SUF2 Q60668 Q61048 Q61136 Q61656 Q61990 Q62093 Q62189 Q62203 Q62241 Q62376 Q63871 Q64213 Q69ZQ2 Q6A068 Q6NV83 Q6P4T2 Q6PDM2 Q6PE01 Q6PGH1 Q6ZWM4 Q80UW8 Q80X98 Q810A7 Q8BG05 Q8BGC0 Q8BGJ9 Q8BGT7 Q8BHJ9 Q8BHS3 Q8BIZ6 Q8BL97 Q8BM39 Q8BTI8 Q8C5N3 Q8CCF0 Q8CEC6 Q8CFI7 Q8CFQ3 Q8CGF7 Q8CGZ0 Q8CH02 Q8JZX4 Q8K194 Q8K1J5 Q8K3W3 Q8K4Z5 Q8QZY9 Q8R081 Q8R0A0 Q8R0F5 Q8R149 Q8R1N0 Q8R344 Q8R3P8 Q8VDP2 Q8VEK3 Q8VH51 Q8VHM5 Q91V81 Q91VC3 Q91VJ5 Q91VN6 Q91YE7 Q91YR7 Q921M3 Q922U1 Q922V4 Q923D4 Q923D5 Q923G2 Q99KG3 Q99KP6 Q99M28 Q99MR6 Q99NB9 Q99PV0 Q9CPW7 Q9CQ49 Q9CQI7 Q9CQQ8 Q9CQT2 Q9CR80 Q9CS00 Q9CSN1 Q9CWL8 Q9CWV6 Q9CWZ3 Q9CXG3 Q9CZU3 Q9D0B0 Q9D0F4 Q9D0T1 Q9D0W5 Q9D198 Q9D287 Q9D554 Q9D6J3 Q9D6L8 Q9D787 Q9D7M8 Q9D868 Q9D883 Q9DAW6 Q9DB98 Q9DBF7 Q9DBM1 Q9DC48 Q9DCD2 Q9EPV8 Q9EQC8 Q9JHS9 Q9JIX8 Q9QXA5 Q9R0U0 Q9R1C7 Q9WV02 Q9WV03 Q9Z1M8 Q9Z1N5 Q9Z204 Q9Z2X1 Q9Z315	4930595M18Rik Acin1 Acinus Aly Alyref Aqr Ars2 Asr2 Auf1 Bat1 Bat1a Bcas2 Bud13 Bud31 Cactin Caper Casc3 Cbp Cbp143 Cbp20 Cbp80 Cbpin Ccdc12 Ccdc16 Ccdc49 Ccdc55 Ccdc94 Cdc40 Cdc5l Cherp Crnkl1 Crop Ctnnbl1 Cwc15 Cwc22 Cwc25 Cwc27 Cyp10l D0HXS9928E D11Ertd730e Dam1 Ddx15 Ddx23 Ddx39b Ddx41 Ddx42 Ddx46 Ddx48 Ddx5 Ddx9 Deah9 Dhx15 Dhx16 Dhx35 Dhx38 Dhx8 Dhx9 Dim1 Ed1 Eftud2 Eif4a3 Fam32a Fam50a Fbp11 Fbp21 Fli-2 Fnbp21 Fnbp3 Fus Fusip1 G7b Gcipip Gpatc1 Gpatch1 Gpkow Gtf2f1 Gtf2f2 Haf Hnrnpa1 Hnrnpa2b1 Hnrnpa3 Hnrnpc Hnrnpd Hnrnpf Hnrnpg Hnrnph1 Hnrnph2 Hnrnpk Hnrnpl Hnrnpr Hnrnpu Hnrnpx Hnrpa1 Hnrpa2b1 Hnrpa3 Hnrpc Hnrpd Hnrpf Hnrpg Hnrph Hnrph1 Hnrph2 Hnrpk Hnrpl Hnrpr Hnrpu Hnrpx Hrs Hsc70 Hsc73 Hspa8 Htatsf1 Ik Isy1 Kiaa0017 Kiaa0122 Kiaa0324 Kiaa0432 Kiaa0560 Kiaa0788 Kiaa0801 Kiaa1160 Leng1 Lsm2 Lsm3 Lsm4 Lsm5 Lsm6 Lsm7 Lsm8 Luc7l3 Luca15 Magoh Mfap1a Mfap1b Mln51 Msy-1 Msy1 Mt1a Mtrex Ncbp1 Ncbp2 Ncm Nhp2l1 Nkap Npw38 Nsep1 Nsrp1 Nsrp70 Nssr Omcg1 Otag12 Pcbp1 Pcbp2 Phf5a Plrg1 Pnn Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2h Polr2i Polr2j Polr2k Polr2l Pop101 Ppih Ppil1 Ppil2 Ppil3 Ppil4 Ppwd1 Pqbp1 Pr264 Prcc Prkrip1 Prp17 Prp18 Prp19 Prp31 Prp4h Prp4k Prp4m Prp8 Prpf17 Prpf18 Prpf19 Prpf3 Prpf31 Prpf38a Prpf4 Prpf40a Prpf4b Prpf6 Prpf8 Prpk Ptb Ptbp1 Puf60 Rbm10 Rbm17 Rbm22 Rbm25 Rbm39 Rbm42 Rbm5 Rbm7 Rbm8 Rbm8a Rbmx Rbmx2 Rbmxp1 Rbmxrt Red Ref1 Refbp1 Rer Rnf113a1 Rnpc2 Rnps1 Rnu1a-1 Rpii215 Rpo2-1 Rpo2-3 Rpo2-4 Sap155 Sap18 Sap61 Sap62 Sart1 Scaf6 Sdccag10 Sde2 Sf1 Sf3a1 Sf3a2 Sf3a3 Sf3b1 Sf3b10 Sf3b2 Sf3b3 Sf3b4 Sf3b5 Sf4 Sfrs1 Sfrs10 Sfrs13a Sfrs2 Sfrs3 Sfrs5 Sfrs7 Sfrs9 Siahbp1 Silg41 Sipp1 Skiip Skiv2l2 Slu7 Smn Smndc1 Smnr Smu1 Snev Snip1 Snrnp200 Snrnp27 Snrnp40 Snrnp70 Snrp116 Snrp1c Snrp70 Snrpa Snrpa1 Snrpb Snrpb2 Snrpc Snrpd1 Snrpd2 Snrpd3 Snrpe Snrpf Snrpg Snrpn Snu13 Snw1 Spf30 Spf45 Sr140 Srp20 Srrm1 Srrm2 Srrt Srsf1 Srsf10 Srsf11 Srsf13a Srsf2 Srsf3 Srsf5 Srsf7 Srsf8 Srsf9 Ssfa1 Steep1 Sugp1 Syf1 Syf2 THOC4 Taf2s Tcerg1 Tis Tnz2 Tra2b Txnl4 Txnl4a U2af1 U2af1l4 U2af2 U2af26 U2af65 U2surp Uap56 Ubl5 Upf3b Usp39 Wbp11 Wbp4 Wdr57 Wdr70 X16 Xab2 Xap5 Yb1 Ybx1 Yju2 Zfm1 Zfp162 Zfp830 Zmat2 Znf830
Voltage gated Potassium channels	A-type voltage-gated potassium channel KCND1 A-type voltage-gated potassium channel KCND2 A-type voltage-gated potassium channel KCND3 Potassium voltage-gated channel subfamily A member 10 Potassium voltage-gated channel subfamily A member 1 Potassium voltage-gated channel subfamily A member 2 Potassium voltage-gated channel subfamily A member 3 Potassium voltage-gated channel subfamily A member 4 Potassium voltage-gated channel subfamily A member 5 Potassium voltage-gated channel subfamily A member 6 Potassium voltage-gated channel subfamily A member 7 Potassium voltage-gated channel subfamily B member 1 Potassium voltage-gated channel subfamily B member 2 Potassium voltage-gated channel subfamily KQT member 1 Potassium voltage-gated channel subfamily KQT member 4 Potassium voltage-gated channel subfamily KQT member 5 Potassium voltage-gated channel subfamily S member 1 Potassium voltage-gated channel subfamily S member 2 Potassium voltage-gated channel subfamily S member 3 Potassium voltage-gated channel subfamily V member 1 Potassium voltage-gated channel subfamily V member 2 Potassium voltage-gated channel, subfamily G, member 2 Voltage-gated delayed rectifier potassium channel KCNH1 Voltage-gated delayed rectifier potassium channel KCNH5 Voltage-gated delayed rectifier potassium channel KCNH8 Voltage-gated inwardly rectifying potassium channel KCNH2 Voltage-gated inwardly rectifying potassium channel KCNH3 Voltage-gated inwardly rectifying potassium channel KCNH7 Voltage-gated potassium channel KCNC1 Voltage-gated potassium channel KCNC2 Voltage-gated potassium channel KCNC3 Voltage-gated potassium channel KCNC4 Voltage-gated potassium channel regulatory subunit KCNF1 Voltage-gated potassium channel regulatory subunit KCNG1 Voltage-gated potassium channel regulatory subunit KCNG3 Voltage-gated potassium channel regulatory subunit KCNG4 Voltage-gated potassium channel subunit beta-1 Voltage-gated potassium channel subunit beta-2 Voltage-gated potassium channel subunit beta-3 potassium Voltage-gated channel, subfamily H (Eag-related), member 4 potassium Voltage-gated channel, subfamily H (Eag-related), member 6	A2A5F7 A2BDX4 A6H8H5 B2RQA1 F7A6P6 O35173 O35174 O35219 P15388 P16388 P16390 P59053 P59111 P62482 P63141 P63143 P97382 P97414 Q03717 Q03719 Q14B80 Q17ST2 Q32ME0 Q60603 Q61423 Q61762 Q61923 Q63959 Q7TSH7 Q80XM3 Q8BQZ8 Q8BZN2 Q8CFS6 Q8R1C0 Q920E3 Q9ER47 Q9JK45 Q9JK97 Q9WVJ0 Q9Z0V1 Q9Z0V2	Ckbeta2 Eag1 Eag2 Elk2 Erg Erg3 I2rf5 Kcna1 Kcna10 Kcna2 Kcna3 Kcna4 Kcna5 Kcna6 Kcna7 Kcna9 Kcnab1 Kcnab2 Kcnab3 Kcnb1 Kcnb2 Kcnb3 Kcnc1 Kcnc2 Kcnc3 Kcnc4 Kcnc7 Kcnd1 Kcnd2 Kcnd3 Kcnf1 Kcng1 Kcng2 Kcng3 Kcng4 Kcnh1 Kcnh2 Kcnh3 Kcnh4 Kcnh5 Kcnh6 Kcnh7 Kcnh8 Kcnq1 Kcnq4 Kcnq5 Kcns1 Kcns2 Kcns3 Kcnv1 Kcnv2 Kiaa1044 Kvb1 Kvbeta4 Kvlqt1 Merg1
Regulation of TP53 Activity through Methylation	Cellular tumor antigen p53 E3 ubiquitin-protein ligase Mdm2 Histone acetyltransferase p300 Histone-lysine N-methyltransferase EHMT1 Histone-lysine N-methyltransferase EHMT2 Junction-mediating and -regulatory protein Lethal(3)malignant brain tumor-like protein 1 N-lysine methyltransferase KMT5A N-lysine methyltransferase SMYD2 Polyubiquitin-B Polyubiquitin-C Protein Mdm4 Protein arginine N-methyltransferase 5 Serine-protein kinase ATM Serine/threonine-protein kinase Chk2 Tetratricopeptide repeat protein 5 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	A2A5N8 B2RWS6 O35618 P02340 P0CG49 P0CG50 P23804 P62983 P62984 Q2YDW7 Q5DW34 Q62388 Q8CIG8 Q8R5A0 Q99LG4 Q9QXM1 Q9Z148 Q9Z265	Atm Bat8 Chek2 Chk2 Ehmt1 Ehmt2 Ep300 Euhmtase1 G9a Glp Jbp1 Jmy Kiaa0681 Kmt1d Kmt5a L3mbt L3mbtl L3mbtl1 Mdm2 Mdm4 Mdmx Ng36 P300 P53 Prmt5 Rad53 Rps27a Setd8 Skb1 Smyd2 Strap Tp53 Trp53 Ttc5 Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2
Antigen processing: Ubiquitination & Proteasome degradation	(E3-independent) E2 ubiquitin-conjugating enzyme UBE2O 26S proteasome non-ATPase regulatory subunit 11 26S proteasome non-ATPase regulatory subunit 12 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 14 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 3 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 7 26S proteasome non-ATPase regulatory subunit 8 26S proteasome regulatory subunit 10B 26S proteasome regulatory subunit 4 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 6B 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 Anaphase-promoting complex subunit 10 Anaphase-promoting complex subunit 11 Anaphase-promoting complex subunit 13 Anaphase-promoting complex subunit 1 Anaphase-promoting complex subunit 2 Anaphase-promoting complex subunit 4 Anaphase-promoting complex subunit 5 Anaphase-promoting complex subunit 7 Anaphase-promoting complex subunit CDC26 Ankyrin repeat and SOCS box protein 10 Ankyrin repeat and SOCS box protein 11 Ankyrin repeat and SOCS box protein 12 Ankyrin repeat and SOCS box protein 13 Ankyrin repeat and SOCS box protein 14 Ankyrin repeat and SOCS box protein 16 Ankyrin repeat and SOCS box protein 17 Ankyrin repeat and SOCS box protein 18 Ankyrin repeat and SOCS box protein 1 Ankyrin repeat and SOCS box protein 4 Ankyrin repeat and SOCS box protein 5 Ankyrin repeat and SOCS box protein 6 Ankyrin repeat and SOCS box protein 7 Ankyrin repeat and SOCS box protein 8 Ankyrin repeat and SOCS box protein 9 Apoptosis-resistant E3 ubiquitin protein ligase 1 BTB/POZ domain-containing protein 1 BTB/POZ domain-containing protein 6 BTB/POZ domain-containing protein KCTD6 BTB/POZ domain-containing protein KCTD7 Bleomycin hydrolase Cell division cycle protein 16 homolog Cell division cycle protein 20 homolog Cell division cycle protein 23 homolog Cell division cycle protein 27 homolog Cullin-1 Cullin-2 Cullin-3 Cullin-5 Cullin-7 Cyclin-F DDB1- and CUL4-associated factor 1 DET1 homolog E3 ISG15--protein ligase Herc6 E3 UFM1-protein ligase 1 E3 ubiquitin-protein ligase ARIH2 E3 ubiquitin-protein ligase Arkadia E3 ubiquitin-protein ligase CBL-B E3 ubiquitin-protein ligase CHIP E3 ubiquitin-protein ligase DTX3L E3 ubiquitin-protein ligase DZIP3 E3 ubiquitin-protein ligase E3D E3 ubiquitin-protein ligase HACE1 E3 ubiquitin-protein ligase HECTD1 E3 ubiquitin-protein ligase HECTD3 E3 ubiquitin-protein ligase HECW2 E3 ubiquitin-protein ligase HERC2 E3 ubiquitin-protein ligase HUWE1 E3 ubiquitin-protein ligase Hakai E3 ubiquitin-protein ligase Itchy E3 ubiquitin-protein ligase LNX E3 ubiquitin-protein ligase LRSAM1 E3 ubiquitin-protein ligase MGRN1 E3 ubiquitin-protein ligase MIB2 E3 ubiquitin-protein ligase MYLIP E3 ubiquitin-protein ligase NEDD4-like E3 ubiquitin-protein ligase NEDD4 E3 ubiquitin-protein ligase NRDP1 E3 ubiquitin-protein ligase Praja-1 E3 ubiquitin-protein ligase Praja-2 E3 ubiquitin-protein ligase RBBP6 E3 ubiquitin-protein ligase RBX1 E3 ubiquitin-protein ligase RLIM E3 ubiquitin-protein ligase RNF114 E3 ubiquitin-protein ligase RNF115 E3 ubiquitin-protein ligase RNF123 E3 ubiquitin-protein ligase RNF126 E3 ubiquitin-protein ligase RNF130 E3 ubiquitin-protein ligase RNF138 E3 ubiquitin-protein ligase RNF144B E3 ubiquitin-protein ligase RNF14 E3 ubiquitin-protein ligase RNF182 E3 ubiquitin-protein ligase RNF19A E3 ubiquitin-protein ligase RNF19B E3 ubiquitin-protein ligase RNF213 E3 ubiquitin-protein ligase RNF217 E3 ubiquitin-protein ligase RNF25 E3 ubiquitin-protein ligase RNF34 E3 ubiquitin-protein ligase RNF4 E3 ubiquitin-protein ligase RNF6 E3 ubiquitin-protein ligase Rnf220 E3 ubiquitin-protein ligase SH3RF1 E3 ubiquitin-protein ligase SIAH1A E3 ubiquitin-protein ligase SIAH2 E3 ubiquitin-protein ligase SMURF1 E3 ubiquitin-protein ligase SMURF2 E3 ubiquitin-protein ligase TRAF7 E3 ubiquitin-protein ligase TRAIP E3 ubiquitin-protein ligase TRIM11 E3 ubiquitin-protein ligase TRIM21 E3 ubiquitin-protein ligase TRIM32 E3 ubiquitin-protein ligase TRIM37 E3 ubiquitin-protein ligase TRIM39 E3 ubiquitin-protein ligase TRIM41 E3 ubiquitin-protein ligase TRIM50 E3 ubiquitin-protein ligase TRIM63 E3 ubiquitin-protein ligase TRIM69 E3 ubiquitin-protein ligase TRIM71 E3 ubiquitin-protein ligase TRIM9 E3 ubiquitin-protein ligase TRIP12 E3 ubiquitin-protein ligase Trim36 E3 ubiquitin-protein ligase UBR1 E3 ubiquitin-protein ligase UBR2 E3 ubiquitin-protein ligase UBR4 E3 ubiquitin-protein ligase ZNRF1 E3 ubiquitin-protein ligase ZNRF2 E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase makorin-1 E3 ubiquitin-protein ligase parkin Elongin-B Elongin-C F-box and WD-40 domain protein 17 F-box and WD-40 domain protein 9 F-box and leucine-rich repeat protein 13 F-box and leucine-rich repeat protein 18 F-box only protein 10 F-box only protein 11 F-box only protein 15 F-box only protein 17 F-box only protein 21 F-box only protein 22 F-box only protein 27 F-box only protein 2 F-box only protein 30 F-box only protein 31 F-box only protein 32 F-box only protein 40 F-box only protein 41 F-box only protein 44 F-box only protein 4 F-box only protein 6 F-box only protein 7 F-box only protein 9 F-box/LRR-repeat protein 12 F-box/LRR-repeat protein 14 F-box/LRR-repeat protein 15 F-box/LRR-repeat protein 16 F-box/LRR-repeat protein 19 F-box/LRR-repeat protein 20 F-box/LRR-repeat protein 21 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 4 F-box/LRR-repeat protein 5 F-box/LRR-repeat protein 7 F-box/LRR-repeat protein 8 F-box/WD repeat-containing protein 10 F-box/WD repeat-containing protein 11 F-box/WD repeat-containing protein 2 F-box/WD repeat-containing protein 4 F-box/WD repeat-containing protein 5 F-box/WD repeat-containing protein 7 F-box/WD repeat-containing protein 8 Fizzy-related protein homolog Gigaxonin Glomulin HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 Hect domain and RLD 3 Kelch repeat and BTB (POZ) domain containing 7 Kelch repeat and BTB domain-containing protein 13 Kelch repeat and BTB domain-containing protein 8 Kelch-like 5 Kelch-like ECH-associated protein 1 Kelch-like protein 11 Kelch-like protein 13 Kelch-like protein 20 Kelch-like protein 21 Kelch-like protein 22 Kelch-like protein 25 Kelch-like protein 2 Kelch-like protein 3 Kelch-like protein 41 Kelch-like protein 42 Kelch-like protein 9 LIM domain only 7 LON peptidase N-terminal domain and RING finger protein 1 Leucine-rich repeat protein 1 Leucine-rich repeat-containing protein 41 Leucyl-cystinyl aminopeptidase NEDD4-like E3 ubiquitin-protein ligase WWP1 NEDD8-activating enzyme E1 catalytic subunit NEDD8-conjugating enzyme UBE2F NEDD8-conjugating enzyme Ubc12 Polyubiquitin-B Polyubiquitin-C Probable E3 ubiquitin-protein ligase HECTD2 Probable E3 ubiquitin-protein ligase HERC4 Proteasomal ubiquitin receptor ADRM1 Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7 Proteasome subunit beta type-1 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta type-5 Proteasome subunit beta type-6 Proteasome subunit beta type-7 Puromycin-sensitive aminopeptidase Putative E3 ubiquitin-protein ligase UNKL RING finger and CHY zinc finger domain-containing protein 1 RING finger protein 37 RING-box protein 2 RNA-binding E3 ubiquitin-protein ligase MEX3C RanBP-type and C3HC4-type zinc finger-containing protein 1 S-phase kinase-associated protein 1 S-phase kinase-associated protein 2 SPRY domain-containing SOCS box protein 1 SPRY domain-containing SOCS box protein 2 SPRY domain-containing SOCS box protein 4 Suppressor of cytokine signaling 1 Suppressor of cytokine signaling 3 Thimet oligopeptidase Tripeptidyl-peptidase 2 Ubiquitin conjugation factor E4 A Ubiquitin-associated domain-containing protein 1 Ubiquitin-conjugating enzyme E2 A Ubiquitin-conjugating enzyme E2 B Ubiquitin-conjugating enzyme E2 C Ubiquitin-conjugating enzyme E2 D1 Ubiquitin-conjugating enzyme E2 D2 Ubiquitin-conjugating enzyme E2 D3 Ubiquitin-conjugating enzyme E2 E1 Ubiquitin-conjugating enzyme E2 E2 Ubiquitin-conjugating enzyme E2 E3 Ubiquitin-conjugating enzyme E2 G1 Ubiquitin-conjugating enzyme E2 G2 Ubiquitin-conjugating enzyme E2 H Ubiquitin-conjugating enzyme E2 J1 Ubiquitin-conjugating enzyme E2 J2 Ubiquitin-conjugating enzyme E2 K Ubiquitin-conjugating enzyme E2 L3 Ubiquitin-conjugating enzyme E2 N Ubiquitin-conjugating enzyme E2 Q1 Ubiquitin-conjugating enzyme E2 Q2 Ubiquitin-conjugating enzyme E2 R1 Ubiquitin-conjugating enzyme E2 R2 Ubiquitin-conjugating enzyme E2 S Ubiquitin-conjugating enzyme E2 W Ubiquitin-conjugating enzyme E2 Z Ubiquitin-conjugating enzyme E2 variant 1 Ubiquitin-conjugating enzyme E2 variant 2 Ubiquitin-like modifier-activating enzyme 1 Ubiquitin-like modifier-activating enzyme 5 Ubiquitin-like modifier-activating enzyme 6 Ubiquitin-like modifier-activating enzyme 7 Ubiquitin-like modifier-activating enzyme ATG7 Ubiquitin-protein ligase E3A Ubiquitin-protein ligase E3B Ubiquitin-protein ligase E3C Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Ubiquitin/ISG15-conjugating enzyme E2 L6 WD repeat and SOCS box-containing protein 1 von Hippel-Lindau disease tumor suppressor	A2A5Z6 A2A6Q5 A2A7Q9 A2AN08 A2AUC9 A2RT62 A6H6S0 D3YY23 D3YY91 D3YYI7 E0CZ16 E9PYF4 E9PYR1 E9PZP8 E9Q555 E9Q735 F2Z461 F8VPX2 G5E870 G5E8C2 O08759 O09061 O35593 O35716 O35718 O54927 O55176 O55234 O70263 O70435 O70481 O88685 O88838 P0CG49 P0CG50 P14685 P26516 P40338 P46471 P46935 P49722 P50636 P51944 P52482 P52483 P53995 P54775 P58544 P60605 P61079 P61080 P61082 P61087 P61089 P61092 P62192 P62196 P62254 P62257 P62334 P62838 P62869 P62878 P62932 P62983 P62984 P63147 P68037 P70195 P83940 P97868 P99026 Q02053 Q05A36 Q06986 Q11011 Q1PSW8 Q38HM4 Q3TQF0 Q3TTA7 Q3TXS7 Q3U0D9 Q3U410 Q3U487 Q3U7U3 Q3UE37 Q3UIR3 Q3UQV5 Q4U2R1 Q5BJ29 Q5FWH2 Q5NCC3 Q5SRY7 Q5SUS0 Q5XPI3 Q60584 Q60692 Q62191 Q64514 Q69ZI1 Q69ZR2 Q6A009 Q6DIA9 Q6I6G8 Q6NS60 Q6P073 Q6PAV2 Q6PB97 Q6PCX9 Q6PDX6 Q6PFE1 Q6WKZ8 Q6ZPJ3 Q6ZPT1 Q6ZWZ2 Q71FD5 Q78JE5 Q7TMY8 Q7TPD1 Q7TPV2 Q7TQF2 Q7TSS2 Q80TF4 Q80TR8 Q80U04 Q80U95 Q80UW2 Q80WG7 Q80X56 Q80ZI6 Q810I2 Q8BFQ9 Q8BFZ4 Q8BG32 Q8BGZ4 Q8BH70 Q8BH75 Q8BIA4 Q8BID8 Q8BJK1 Q8BJL1 Q8BK06 Q8BK26 Q8BKD6 Q8BM54 Q8BNL5 Q8BTZ4 Q8BX13 Q8BZM1 Q8BZQ7 Q8BZZ3 Q8C129 Q8C1A5 Q8C2S5 Q8C432 Q8C4V4 Q8C6Y6 Q8C7M3 Q8C7R4 Q8C828 Q8C863 Q8C878 Q8CA72 Q8CCJ3 Q8CDU4 Q8CDU6 Q8CE33 Q8CFE8 Q8CFI0 Q8CFI2 Q8CH72 Q8CHG5 Q8CHQ0 Q8CIG9 Q8JZP3 Q8K1C9 Q8K2H6 Q8K2J9 Q8K2Z8 Q8R016 Q8R034 Q8R2P1 Q8R349 Q8R516 Q8R5B6 Q8VBV4 Q8VBX0 Q8VCK5 Q8VDH1 Q8VDI7 Q8VDM4 Q8VDW4 Q8VE47 Q8VE73 Q8VEM1 Q8VHA6 Q8VHP9 Q8VHS5 Q8VIG6 Q91V17 Q91W61 Q91W82 Q91W96 Q91YL2 Q91ZT7 Q91ZT8 Q91ZT9 Q91ZU0 Q91ZU1 Q921J4 Q922B6 Q925F4 Q99JI4 Q99JN2 Q99JP4 Q99KR6 Q99ML9 Q99PQ2 Q9CPU7 Q9CPX9 Q9CQ31 Q9CQE0 Q9CR50 Q9CUN6 Q9CX56 Q9CY34 Q9CZV8 Q9CZY3 Q9D074 Q9D0A0 Q9D0C1 Q9D1A4 Q9D1C1 Q9D2M8 Q9D4H8 Q9D5L7 Q9D5V5 Q9D738 Q9D8W5 Q9D906 Q9DBK7 Q9DBU5 Q9EPX5 Q9ES34 Q9ESN2 Q9ET26 Q9JI90 Q9JIY2 Q9JJ66 Q9JJZ4 Q9JKV1 Q9JLV5 Q9JMJ2 Q9QUM9 Q9QXP6 Q9QXW2 Q9QZM8 Q9QZN0 Q9QZN4 Q9QZR0 Q9QZS2 Q9QZU9 Q9R1K5 Q9R1P0 Q9R1P1 Q9R1P3 Q9R1P4 Q9WTV7 Q9WTX5 Q9WTX6 Q9WTZ1 Q9WUB0 Q9WUD1 Q9WV71 Q9WV74 Q9WVJ2 Q9WVM3 Q9WVS6 Q9Z0Z3 Q9Z1K6 Q9Z255 Q9Z2U0 Q9Z2U1 Q9Z2X8	Adrm1 Afh Anapc1 Anapc10 Anapc11 Anapc13 Anapc2 Anapc4 Anapc5 Anapc6 Anapc7 Anapc8 Apc10 Apc7 Apg7l Arel1 Ari2 Arih2 Arnip Asb1 Asb10 Asb11 Asb12 Asb13 Asb14 Asb16 Asb17 Asb18 Asb4 Asb5 Asb6 Asb7 Asb8 Asb9 Atg7 Bbap Bklhd2 Blmh Blu Btbd1 Btbd6 Btrcp2 Cblb Cbll1 Ccnf Cdc16 Cdc20 Cdc23 Cdc26 Cdc27 Cdc34 Cdc34b Chimp Chip Cis3 Cish1 Cish3 Croc1 Cul1 Cul2 Cul3 Cul5 Cul7 D11Moh35 D5Ertd249e D6Ertd538e Dcaf1 Det1 Drc6 Dtx3l Dzip3 E2epf Elob Eloc Fap48 Fbl12 Fbl14 Fbl2 Fbl21 Fbl3a Fbl8 Fbs1 Fbs2 Fbw1b Fbw4 Fbw5 Fbw7 Fbwd6 Fbx15 Fbx17 Fbx2 Fbx21 Fbx22 Fbx4 Fbxl12 Fbxl13 Fbxl14 Fbxl15 Fbxl16 Fbxl18 Fbxl19 Fbxl20 Fbxl21 Fbxl3 Fbxl3a Fbxl3b Fbxl4 Fbxl5 Fbxl7 Fbxl8 Fbxo10 Fbxo11 Fbxo15 Fbxo17 Fbxo2 Fbxo21 Fbxo22 Fbxo26 Fbxo27 Fbxo30 Fbxo31 Fbxo32 Fbxo37 Fbxo4 Fbxo40 Fbxo41 Fbxo44 Fbxo6 Fbxo6a Fbxo6b Fbxo7 Fbxo9 Fbxw10 Fbxw11 Fbxw17 Fbxw1b Fbxw2 Fbxw4 Fbxw5 Fbxw6 Fbxw7 Fbxw8 Fbxw9 Flrf Fyr Fzr Fzr1 G1rp Gan Geg-154 Glmn Gm1127 Gm634 Gp110 Grcc9 Gsrp H10bh Hace1 Hakai Hectd1 Hectd2 Hectd3 Hecw2 Herc1 Herc2 Herc3 Herc4 Herc6 Hip2 Huwe1 Ibrdc1 Ibrdc2 Ibrdc3 Inrf2 Itch Jdf2 Kbtbd10 Kbtbd13 Kbtbd7 Kbtbd8 Kctd6 Kctd7 Keap1 Kiaa0010 Kiaa0076 Kiaa0093 Kiaa0132 Kiaa0282 Kiaa0312 Kiaa0317 Kiaa0349 Kiaa0393 Kiaa0438 Kiaa0439 Kiaa0462 Kiaa0544 Kiaa0675 Kiaa0714 Kiaa0776 Kiaa0800 Kiaa0840 Kiaa0875 Kiaa0898 Kiaa10 Kiaa1131 Kiaa1301 Kiaa1309 Kiaa1320 Kiaa1340 Kiaa1354 Kiaa1494 Kiaa1734 Kiaa1842 Kiaa1940 Kiaa4210 Kleip Klhdc5 Klhl11 Klhl13 Klhl2 Klhl20 Klhl21 Klhl22 Klhl25 Klhl3 Klhl41 Klhl42 Klhl5 Klhl9 Kpc1 Kpc2 Lin41 Lister Lmo7 Lmp19 Lmp3 Lmpc3 Lnpep Lnx Lnx1 Lonrf1 Lrr1 Lrrc41 Lrsam1 Ltn1 Maxer Mcpr Mex3c Mgrn1 Mib2 Mkrn1 Mmc14 Mms2 Mov-34 Mov34 Mss1 Muf1 Murf1 Mylip Mystr Ncube1 Ncube2 Nedd-4 Nedd4 Nedd4-1 Nedd4a Nedd4b Nedd4l Nedl2 Nin283 Nklam Npepps Nrdp1 Opm Ovtm P2pr P91a Pact Pad1 Park2 Pja1 Pja2 Posh Posh1 Ppa Prkn Psa Psma1 Psma2 Psma3 Psma4 Psma5 Psma6 Psma7 Psmb1 Psmb2 Psmb3 Psmb4 Psmb5 Psmb6 Psmb7 Psmc1 Psmc2 Psmc3 Psmc4 Psmc5 Psmc6 Psmd1 Psmd11 Psmd12 Psmd13 Psmd14 Psmd2 Psmd3 Psmd6 Psmd7 Psmd8 Rad6a Rad6b Rbbp6 Rbck Rbck1 Rbx1 Rbx2 Rcad Rchy1 Rf1 Rjs Rkhd2 Rlim Rnf111 Rnf114 Rnf115 Rnf12 Rnf123 Rnf126 Rnf130 Rnf131 Rnf138 Rnf14 Rnf144b Rnf160 Rnf182 Rnf19 Rnf19a Rnf19b Rnf213 Rnf217 Rnf220 Rnf23 Rnf25 Rnf34 Rnf36 Rnf37 Rnf4 Rnf41 Rnf6 Rnf7 Ro52 Rpf1 Rps27a Sag Sbx Sh3md2 Sh3rf1 Siah1a Siah2 Skd Skp1 Skp1a Skp2 Smurf1 Smurf2 Socs1 Socs3 Spsb1 Spsb2 Spsb4 Ssa1 Ssb1 Ssb2 Ssb4 Ssi1 Stub1 Sug1 Sug2 Tbp1 Tbp7 Tceb1 Tceb2 Tfp Thop1 Tpp2 Traf7 Traip Triad1 Triad2 Trif Trim11 Trim21 Trim32 Trim36 Trim37 Trim39 Trim41 Trim50 Trim63 Trim69 Trim71 Trim9 Trip Trip12 Tsg24 Tstap91a Uba1 Uba3 Uba5 Uba52 Uba6 Uba7 Uba80 Ubac1 Ubadc1 Ubb Ubc Ubc-rs2 Ubc12 Ubc3b Ubc4 Ubc7 Ubce4 Ubce5 Ubce7 Ubce7ip3 Ubce8 Ubcep1 Ubcep2 Ubch10 Ubch3 Ubch4 Ubch5b Ubcm2 Ubcm3 Ube1 Ube1ax Ube1c Ube1l Ube1l2 Ube1x Ube2a Ube2b Ube2c Ube2cbp Ube2d1 Ube2d2 Ube2d2a Ube2d3 Ube2e1 Ube2e2 Ube2e3 Ube2f Ube2fa Ube2g Ube2g1 Ube2g2 Ube2h Ube2j1 Ube2j2 Ube2k Ube2l3 Ube2l6 Ube2m Ube2n Ube2o Ube2q Ube2q1 Ube2q2 Ube2r1 Ube2r2 Ube2s Ube2v1 Ube2v2 Ube2w Ube2z Ube3a Ube3b Ube3c Ube3d Ube4a Ubox5 Ubr1 Ubr2 Ubr4 Uev2 Ufd2b Ufl1 Uip28 Uip48 Uip5 Unkl Ureb1 Vhl Vhlh Vprbp Wsb1 Wwp1 Xybp Zfp228 Zfp294 Zfp313 Zfp363 Zfp364 Znf228 Znf294 Znf313 Znf363 Znf364 Znrf1 Znrf2
Ub-specific processing proteases	26S proteasome non-ATPase regulatory subunit 11 26S proteasome non-ATPase regulatory subunit 12 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 14 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 3 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 7 26S proteasome non-ATPase regulatory subunit 8 26S proteasome regulatory subunit 10B 26S proteasome regulatory subunit 4 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 6B 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 Androgen receptor Antiviral innate immune response receptor RIG-I Ataxin-7 Axin-1 Axin-2 Baculoviral IAP repeat-containing protein 2 Baculoviral IAP repeat-containing protein 3 Beclin-1 Beta-2 adrenergic receptor Beta-arrestin-1 Beta-arrestin-2 CAAX prenyl protease 2 Cell division cycle protein 20 homolog Cellular tumor antigen p53 Centriolar coiled-coil protein of 110 kDa Claspin Cyclin-A1 Cyclin-A2 Cystic fibrosis transmembrane conductance regulator DNA damage-binding protein 2 DNA polymerase beta E3 ubiquitin-protein ligase Mdm2 E3 ubiquitin-protein ligase RNF123 E3 ubiquitin-protein ligase RNF128 E3 ubiquitin-protein ligase RNF146 E3 ubiquitin-protein ligase SIAH2 E3 ubiquitin-protein ligase SMURF2 Forkhead box protein O4 Hepatocyte growth factor-regulated tyrosine kinase substrate Histone H2A type 1-B Histone H2A type 1-C Histone H2A type 1-E Histone H2A type 1-F Histone H2A type 1-G Histone H2A type 1-H Histone H2A type 1-I Histone H2A type 1-K Histone H2A type 1-N Histone H2A type 1-O Histone H2A type 1-P Histone H2A type 2-A Histone H2A type 2-B Histone H2A type 2-C Histone H2A type 3 Histone H2A.J Histone H2A Histone acetyltransferase KAT2A Hypoxia-inducible factor 1-alpha Insulin-degrading enzyme Interferon-induced helicase C domain-containing protein 1 Interleukin-33 Kelch-like ECH-associated protein 1 M-phase inducer phosphatase 1 Methionine adenosyltransferase 2 subunit beta Mitochondrial Rho GTPase 1 Mitochondrial import receptor subunit TOM20 homolog Mitochondrial import receptor subunit TOM70 Mitochondrial ubiquitin ligase activator of NFKB 1 Mitogen-activated protein kinase kinase kinase 7 Mothers against decapentaplegic homolog 1 Mothers against decapentaplegic homolog 2 Mothers against decapentaplegic homolog 3 Mothers against decapentaplegic homolog 4 Mothers against decapentaplegic homolog 7 Myc proto-oncogene protein NF-kappa-B essential modulator NF-kappa-B inhibitor alpha Non-selective voltage-gated ion channel VDAC1 Peptidyl-prolyl cis-trans isomerase FKBP8 Peptidyl-tRNA hydrolase 2, mitochondrial Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN Poly [ADP-ribose] polymerase tankyrase-1 Poly [ADP-ribose] polymerase tankyrase-2 Polyubiquitin-B Polyubiquitin-C Proteasomal ubiquitin receptor ADRM1 Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7 Proteasome subunit beta type-1 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta type-5 Proteasome subunit beta type-6 Proteasome subunit beta type-7 Protein Mdm4 Receptor-interacting serine/threonine-protein kinase 1 RuvB-like 1 S-phase kinase-associated protein 2 Signal transducing adapter molecule 2 Sin3 histone deacetylase corepressor complex component SDS3 Sorting nexin-3 TGF-beta receptor type-1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 TNF receptor-associated factor 2 TNF receptor-associated factor 6 Trans-acting T-cell-specific transcription factor GATA-3 Transcription initiation factor TFIID subunit 10 Transcription initiation factor TFIID subunit 9B Transcriptional adapter 3 Transcriptional adapter Transformation/transcription domain-associated protein Ubiquitin carboxyl-terminal hydrolase 10 Ubiquitin carboxyl-terminal hydrolase 11 Ubiquitin carboxyl-terminal hydrolase 12 Ubiquitin carboxyl-terminal hydrolase 13 Ubiquitin carboxyl-terminal hydrolase 14 Ubiquitin carboxyl-terminal hydrolase 15 Ubiquitin carboxyl-terminal hydrolase 16 Ubiquitin carboxyl-terminal hydrolase 17-like protein A Ubiquitin carboxyl-terminal hydrolase 17-like protein B Ubiquitin carboxyl-terminal hydrolase 17-like protein C Ubiquitin carboxyl-terminal hydrolase 17-like protein D Ubiquitin carboxyl-terminal hydrolase 17-like protein E Ubiquitin carboxyl-terminal hydrolase 19 Ubiquitin carboxyl-terminal hydrolase 20 Ubiquitin carboxyl-terminal hydrolase 21 Ubiquitin carboxyl-terminal hydrolase 22 Ubiquitin carboxyl-terminal hydrolase 24 Ubiquitin carboxyl-terminal hydrolase 25 Ubiquitin carboxyl-terminal hydrolase 26 Ubiquitin carboxyl-terminal hydrolase 28 Ubiquitin carboxyl-terminal hydrolase 29 Ubiquitin carboxyl-terminal hydrolase 2 Ubiquitin carboxyl-terminal hydrolase 30 Ubiquitin carboxyl-terminal hydrolase 33 Ubiquitin carboxyl-terminal hydrolase 34 Ubiquitin carboxyl-terminal hydrolase 37 Ubiquitin carboxyl-terminal hydrolase 3 Ubiquitin carboxyl-terminal hydrolase 42 Ubiquitin carboxyl-terminal hydrolase 44 Ubiquitin carboxyl-terminal hydrolase 47 Ubiquitin carboxyl-terminal hydrolase 48 Ubiquitin carboxyl-terminal hydrolase 4 Ubiquitin carboxyl-terminal hydrolase 5 Ubiquitin carboxyl-terminal hydrolase 7 Ubiquitin carboxyl-terminal hydrolase 8 Ubiquitin carboxyl-terminal hydrolase 9X Ubiquitin carboxyl-terminal hydrolase CYLD Ubiquitin recognition factor in ER-associated degradation protein 1 Ubiquitin thioesterase OTUB1 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Ubl carboxyl-terminal hydrolase 18 Voltage-dependent anion-selective channel protein 2 Voltage-dependent anion-selective channel protein 3 WD repeat domain 20 WD repeat-containing protein 48	A2A5Z6 B1AY13 B2RQC2 C0HKE1 C0HKE2 C0HKE4 C0HKE5 C0HKE6 C0HKE7 C0HKE8 C0HKE9 D3Z4Z0 E9Q9U0 G5E8G2 G5E8I7 O08586 O08863 O09061 O35253 O35465 O35593 O35618 O35625 O55234 O70435 O70492 O88522 O88566 O88597 O88623 O88685 O88811 P01108 P02340 P0CG49 P0CG50 P14685 P18762 P19091 P23772 P23804 P26361 P26516 P35123 P39429 P46471 P48964 P49722 P51943 P52479 P54775 P56399 P57080 P57791 P60122 P62192 P62196 P62334 P62983 P62984 P70195 P70196 P70340 P70362 P70398 P97471 P99026 Q06986 Q3TXS7 Q3UES3 Q3UJD6 Q3UN04 Q3UWE6 Q3V0C5 Q5BKP2 Q5DU02 Q5I043 Q5XPI3 Q60692 Q60855 Q60930 Q60931 Q60932 Q61068 Q61221 Q61456 Q62073 Q62210 Q62432 Q64522 Q64523 Q64729 Q6A4J8 Q6GSS7 Q6NZA9 Q6PFX9 Q6Q899 Q6ZQ93 Q7M764 Q7TQI3 Q7TSH4 Q80TQ2 Q80U87 Q80YR7 Q80YV3 Q8BFU2 Q8BG32 Q8BG51 Q8BH57 Q8BR65 Q8BUN5 Q8BVZ5 Q8BWG8 Q8BY87 Q8C0R0 Q8C2S0 Q8C6M1 Q8CF89 Q8CGP4 Q8CGP5 Q8CGP6 Q8CGP7 Q8K0H5 Q8K409 Q8R0L9 Q8R1M2 Q8R2Y8 Q8R4I1 Q8R5F7 Q8R5H1 Q8R5K2 Q8VCM5 Q8VDM4 Q91W36 Q91YI4 Q99J79 Q99JI4 Q99K46 Q99LB6 Q99LG0 Q99LI8 Q99MX1 Q9CX56 Q9CZW5 Q9CZW6 Q9D304 Q9D8W5 Q9D9M2 Q9DCC8 Q9ES63 Q9JHD2 Q9JHR7 Q9JJ66 Q9JKV1 Q9JMA1 Q9QUM9 Q9QZL6 Q9R1P0 Q9R1P1 Q9R1P3 Q9R1P4 Q9WTV6 Q9WVH3 Q9WVJ2 Q9Z0Z3 Q9Z1E3 Q9Z2U0 Q9Z2U1 Q9Z2X8	Abcc7 Ada3 Adrb2 Adrb2r Adrm1 Afx Afx1 Ar Arht1 Arrb1 Arrb2 Atxn7 Axin Axin1 Axin2 Becn1 Birc2 Birc3 Ccna Ccna1 Ccna2 Ccp110 Cdc20 Cdc25a Cdc25m3 Cep110 Cftr Clspn Cp110 Cyca Cyca2 Cyld Cyld1 D16Wsu109e DUB-2 Ddb2 Ddx58 Dpc4 Dub-1 Dub1 Dub1a Dub2 Dub2a Dub3 Dub6 Face2 Fafl Fam Fkbp38 Fkbp8 Fkhr3 Foxo4 Fu Gata-3 Gata3 Gcn5l2 Gide Gp110 Grail Greul1 H2ac1 H2ac11 H2ac12 H2ac13 H2ac15 H2ac20 H2ac21 H2ac25 H2ac4 H2ac6 H2ac8 H2aj H2aw Hausp Hbp Hgs Hif1a Hist1h2aa Hist1h2ab Hist1h2ac Hist1h2ae Hist1h2af Hist1h2ag Hist1h2ah Hist1h2ai Hist1h2ak Hist1h2an Hist1h2ao Hist1h2ap Hist2h2aa1 Hist2h2aa2 Hist2h2ab Hist2h2ac Hist3h2a Hrs Ide Ifih1 Ikba Ikbkg Il33 Inrf2 Isot Kat2a Keap1 Kiaa0055 Kiaa0132 Kiaa0190 Kiaa0419 Kiaa0529 Kiaa0570 Kiaa0849 Kiaa0891 Kiaa1003 Kiaa1063 Kiaa1449 Kiaa1515 Kiaa1594 Kiaa4202 Kpc1 Lmp19 Lmp3 Lmpc3 Madh1 Madh2 Madh3 Madh4 Madh7 Madh8 Madr1 Madr2 Map3k7 Map3k7ip1 Mat2b Mdm2 Mdm4 Mdmx Mllt7 Mmac1 Mmc14 Mov-34 Mov34 Mss1 Mul1 Murr2 Myc Nemo Nfkbia Nr3c4 Ode-1 Otub1 P53 P91a Pad1 Polb Psma1 Psma2 Psma3 Psma4 Psma5 Psma6 Psma7 Psmb1 Psmb2 Psmb3 Psmb4 Psmb5 Psmb6 Psmb7 Psmc1 Psmc2 Psmc3 Psmc4 Psmc5 Psmc6 Psmd1 Psmd11 Psmd12 Psmd13 Psmd14 Psmd2 Psmd3 Psmd6 Psmd7 Psmd8 Pten Pth2 Ptrh2 Rce1 Rce1a Rhot1 Rigi Rinp Rip Ripk1 Rnf123 Rnf128 Rnf146 Rps27a Ruvbl1 Sam11 Sca7 Sds3 Siah2 Skp2 Smad1 Smad2 Smad3 Smad4 Smad7 Smurf2 Snx3 Stam2 Suds3 Sug1 Sug2 Tab1 Tada2b Tada3 Tada3l Taf10 Taf2h Taf9b Taf9l Tafii30 Tak1 Tank2 Tbp1 Tbp7 Tgfbr1 Tip49 Tip49a Tnks Tnks1 Tnks2 Tomm20 Tomm70 Tomm70a Tp53 Traf2 Traf6 Trp53 Trrap Tstap91a Uaf1 Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2 Ubh1 Ubp41 Ubp43 Ubpy Uchrp Ufd1 Ufd1l Unp Usp10 Usp11 Usp12 Usp13 Usp14 Usp15 Usp16 Usp17 Usp17l2 Usp17l5 Usp17la Usp17lb Usp17lc Usp17ld Usp17le Usp18 Usp19 Usp2 Usp20 Usp21 Usp22 Usp23 Usp24 Usp25 Usp26 Usp28 Usp29 Usp3 Usp30 Usp33 Usp34 Usp37 Usp4 Usp42 Usp44 Usp47 Usp48 Usp5 Usp7 Usp8 Usp9x Vdac1 Vdac2 Vdac3 Vdac5 Vdac6 Vdu1 Vdu2 Wdr20 Wdr20a Wdr48
Hedgehog 'on' state	26S proteasome non-ATPase regulatory subunit 11 26S proteasome non-ATPase regulatory subunit 12 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 14 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 3 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 7 26S proteasome non-ATPase regulatory subunit 8 26S proteasome regulatory subunit 10B 26S proteasome regulatory subunit 4 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 6B 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 Cilium assembly protein DZIP1 Cullin-3 E3 ubiquitin-protein ligase Itchy E3 ubiquitin-protein ligase RBX1 E3 ubiquitin-protein ligase SMURF1 E3 ubiquitin-protein ligase SMURF2 EvC complex member EVC G-protein coupled receptor 161 Kinesin-like protein KIF7 Limbin Parafibromin Polyubiquitin-B Polyubiquitin-C Proteasomal ubiquitin receptor ADRM1 Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7 Proteasome subunit beta type-1 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta type-5 Proteasome subunit beta type-6 Proteasome subunit beta type-7 Protein numb homolog Protein patched homolog 1 Protein smoothened Serine/threonine-protein kinase ULK3 Speckle-type POZ protein-like Speckle-type POZ protein Suppressor of fused homolog Transcriptional activator GLI3 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Zinc finger protein GLI1 Zinc finger protein GLI2	A2A5Z6 B2RPY5 B7ZNG0 O09061 O35593 O55234 O70435 O88685 P0CG49 P0CG50 P14685 P26516 P46471 P47806 P49722 P54775 P56726 P57680 P62192 P62196 P62334 P62878 P62983 P62984 P70195 P99026 Q0VGT2 Q2M2N2 Q3TXS7 Q3U3Q1 Q60692 Q61115 Q61602 Q6ZWS8 Q8BG32 Q8BMD2 Q8C863 Q8JZM7 Q8K1G2 Q8VDM4 Q99JI4 Q9CUN6 Q9CX56 Q9D8W5 Q9JKV1 Q9JLV5 Q9QUM9 Q9QZS3 Q9R1P0 Q9R1P1 Q9R1P3 Q9R1P4 Q9WVJ2 Q9Z0P7 Q9Z2U0 Q9Z2U1	Adrm1 Cdc73 Cul3 Dzip1 Evc Evc2 Gli Gli1 Gli2 Gli3 Gm208 Gp110 Gpr161 Itch Kiaa0996 Kif7 Lbn Lmp19 Lmp3 Lmpc3 Mmc14 Mov-34 Mov34 Mss1 Numb P91a Pad1 Pcif1 Psma1 Psma2 Psma3 Psma4 Psma5 Psma6 Psma7 Psmb1 Psmb2 Psmb3 Psmb4 Psmb5 Psmb6 Psmb7 Psmc1 Psmc2 Psmc3 Psmc4 Psmc5 Psmc6 Psmd1 Psmd11 Psmd12 Psmd13 Psmd14 Psmd2 Psmd3 Psmd6 Psmd7 Psmd8 Ptch Ptch1 Rbx1 Rps27a Smo Smoh Smurf1 Smurf2 Spop Spopl Sufu Sug1 Sug2 Tbp1 Tbp7 Thp Tstap91a Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2 Ulk3
Regulation of RUNX3 expression and activity	26S proteasome non-ATPase regulatory subunit 11 26S proteasome non-ATPase regulatory subunit 12 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 14 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 3 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 7 26S proteasome non-ATPase regulatory subunit 8 26S proteasome regulatory subunit 10B 26S proteasome regulatory subunit 4 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 6B 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 Core-binding factor subunit beta E3 ubiquitin-protein ligase Mdm2 E3 ubiquitin-protein ligase SMURF1 E3 ubiquitin-protein ligase SMURF2 Histone acetyltransferase p300 Polyubiquitin-B Polyubiquitin-C Proteasomal ubiquitin receptor ADRM1 Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7 Proteasome subunit beta type-1 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta type-5 Proteasome subunit beta type-6 Proteasome subunit beta type-7 Proto-oncogene tyrosine-protein kinase Src Runt-related transcription factor 3 Transforming growth factor beta-1 proprotein Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	A2A5Z6 B2RWS6 O09061 O35593 O55234 O70435 O88685 P04202 P05480 P0CG49 P0CG50 P14685 P23804 P26516 P46471 P49722 P54775 P62192 P62196 P62334 P62983 P62984 P70195 P99026 Q08024 Q3TXS7 Q60692 Q64131 Q8BG32 Q8VDM4 Q99JI4 Q9CUN6 Q9CX56 Q9D8W5 Q9JKV1 Q9QUM9 Q9R1P0 Q9R1P1 Q9R1P3 Q9R1P4 Q9WVJ2 Q9Z2U0 Q9Z2U1	Adrm1 Aml2 Cbfa3 Cbfb Ep300 Gp110 Lmp19 Lmp3 Lmpc3 Mdm2 Mmc14 Mov-34 Mov34 Mss1 P300 P91a Pad1 Pebp2a3 Pebp2b Pebpb2 Psma1 Psma2 Psma3 Psma4 Psma5 Psma6 Psma7 Psmb1 Psmb2 Psmb3 Psmb4 Psmb5 Psmb6 Psmb7 Psmc1 Psmc2 Psmc3 Psmc4 Psmc5 Psmc6 Psmd1 Psmd11 Psmd12 Psmd13 Psmd14 Psmd2 Psmd3 Psmd6 Psmd7 Psmd8 Rps27a Runx3 Smurf1 Smurf2 Src Sug1 Sug2 Tbp1 Tbp7 Tgfb1 Tstap91a Uba52 Uba80 Ubb Ubc Ubcep1 Ubcep2

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